Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1225 ATGGGCAAGGAGTGGTATTTTGCTGGAAGATCATCTAAGAGAGGTGTAGTAGGAGTAGGAGGTGAAGCTGAGGCTGAAACACAAGCCCCTTCTGGTTGCATGTGTGCTGTTTTTCAGTTCTTTGATTTCCATCCTTTTCACTTTCCCAACATAAACCAACACCACCAACAAGAACAGACCTCTTTCAAGCCACCCTCATGCACTTCAGAAGACCACACCACAGTCCCAAAAGGCGCTGAAGCACCTAGGAACAGCTTGGAGTCAGAGGATGGTGATGGTACAGTTTCATCTCTCTCATCAAAAGAAGAAGATTTTAAAATTCCTAAGAATATTGTACAAATTAAGACAAGTGGAGGCACAAGAGCAAGTGGTGGAAATTTGAATGACTTGTCCTCAGAACTCACCGGCTCTCCAGGGACAAAGACACCAACTTTGGTGGCCAGGTTAATGGGTTTGGATCTTCTTCCAGGGGCAAACTCACCATCTTTTTCTTCATGTCTTTCAACTCCAAACACACAAGGCAATGTGTCACATCTTCACCACCACCTGAGACACAAGCAACATGTCCAAACCAAACACAGAAACAGCATAGACAGTAGTGACATAGCCTCCACAAGATCTTTGCCTGAGACACCAAGAATCTCCTCAGCAAGAAGATCAGATGTTGATCATCACCACAGACTCTCACTCCAAATCAACAAGGAAAACATGAACCTTGGTGAGGATTTGGAGCTCCCTAGGCTCTCATTTTCCAAAAGGAAGAGTGATGAGAACAATGGCAGGAGTCCAAGCTACTATGCCAGACAAATTGTCAAACAGGTTAAGGAAAGTGTGAGCAGAAAAGTTGGTCAAGACATCACCAACACTAGTCTCAAAACCAGAGAAGAAAATGTAGGCCAATTCAGAAGCAAAAAATCTCCCAAAACATCATCACTGAAAGCAATTGATGAAACTGAAACCAACCCTGATAAACAATCAAACCAATCTCCCTATTTCCCAAGGCTTAGATTCATTGACAAACACAAACCAAACACAACAACAACATCAACACCATCATCACTCACAACGAAAGACCAAAACATGCTGAAACTGCCACCACCTCCTCCAGTTAACACTCAACCACATCTTCCAAGAGTTTTAACAAAACCAAAGGCTCAAACATTGGTGCCAGAGCAGCAAGAGTTTCACCAGAACAACAAATCTGTTCCAAAATGCAAAAAGGCTACAAATGAAAAGTTCAACTCAAGGCTCATCAAAAGGCCTCCACAGACATCAGACATCATCAGAAACAAGCAAGAAGAACCATTCATCATTCTTCGTCCCACATCGCCTACTGGAGCCAGTGACATCAAAAACACCAAAAGCAAGAAAAATCATCATCCATTGTCAAGCAATATTCTCCTCAACAACATCAACAATGTACCAAATCTTCTACCTGTCAAGACAGACCCTTCTCCTCCAGCAACCAAAATTCCTTCCAAACAGTCACAGGTCTGTGATACTTGTCATCAAGAGTCCAAAAGCAGTTCACAGTTATCTAGTTGTGCGCGCCAGAGGTACAAACAAGAAGGAACAACAACCACACTACTCGCTACCCGAGATAGATCAGAGAACAAGCCTAACAACGGTGCTTTCTCCTTCTCCTCCACCACCGTCGTCCAACCTCACACCCCACAAGAGCTTCAGTACATCACAGCAATCCTAGCCCGTACCACTGCCCTAAAGTCACAGGGTATCCCCACAACACTGTCCTTAAACCAAGGGTGGTTCTCTCCGACCAACCCACTCGACCCATCAATCTTCCACCACCTCGAACACCCAGAAAGCGACAAAGATCGCAACTTTTCCCCAAAAGACCAACTGGGTCACCGTTGGAATCGGAGATTGCTGTTCGATTTGGTGGATGAGGTTCTGAGGGAGATTTTGGGGCCTCAAGAGGGAGAGAGAGAAAAGAAGAGACTTTGGTTTTTGAAGGGTGGTGTTTGTAACCAAAAAGGGAGCGTTGTAGGGTTGGTGGAGAGGGTGTGGGAGAGGGTCGAGGAGTTCCCGCGTGCCAAGTGTGAGGTGTTGGAAGACATTGATGAGTTGGTCGACATGCAGAGAGAGAAAGATGGTGAGAAAATGGAAGAAGAAGGGGAAGGGTTGGTGGCAGAGATTGAAGGGAACATATGGGACACGTTAGTGCATGAAACTGTTGTGGTTATGGATTGTTGGGGAAATGCTAAAAAACAAAAATTATTACTATATGATGATGATTCCAAAATACCATCACATGTTTGTAGTCTCAATCAATTTTAA 2298 0.4439 MGKEWYFAGRSSKRGVVGVGGEAEAETQAPSGCMCAVFQFFDFHPFHFPNINQHHQQEQTSFKPPSCTSEDHTTVPKGAEAPRNSLESEDGDGTVSSLSSKEEDFKIPKNIVQIKTSGGTRASGGNLNDLSSELTGSPGTKTPTLVARLMGLDLLPGANSPSFSSCLSTPNTQGNVSHLHHHLRHKQHVQTKHRNSIDSSDIASTRSLPETPRISSARRSDVDHHHRLSLQINKENMNLGEDLELPRLSFSKRKSDENNGRSPSYYARQIVKQVKESVSRKVGQDITNTSLKTREENVGQFRSKKSPKTSSLKAIDETETNPDKQSNQSPYFPRLRFIDKHKPNTTTTSTPSSLTTKDQNMLKLPPPPPVNTQPHLPRVLTKPKAQTLVPEQQEFHQNNKSVPKCKKATNEKFNSRLIKRPPQTSDIIRNKQEEPFIILRPTSPTGASDIKNTKSKKNHHPLSSNILLNNINNVPNLLPVKTDPSPPATKIPSKQSQVCDTCHQESKSSSQLSSCARQRYKQEGTTTTLLATRDRSENKPNNGAFSFSSTTVVQPHTPQELQYITAILARTTALKSQGIPTTLSLNQGWFSPTNPLDPSIFHHLEHPESDKDRNFSPKDQLGHRWNRRLLFDLVDEVLREILGPQEGEREKKRLWFLKGGVCNQKGSVVGLVERVWERVEEFPRAKCEVLEDIDELVDMQREKDGEKMEEEGEGLVAEIEGNIWDTLVHETVVVMDCWGNAKKQKLLLYDDDSKIPSHVCSLNQF* 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1225 765 Pfam Domain of unknown function (DUF4378) 560 730 IPR025486 -
Gso9g1225 765 MobiDBLite consensus disorder prediction 54 102 - -
Gso9g1225 765 MobiDBLite consensus disorder prediction 196 214 - -
Gso9g1225 765 Pfam DUF761-associated sequence motif 135 160 IPR032795 -
Gso9g1225 765 MobiDBLite consensus disorder prediction 342 360 - -
Gso9g1225 765 MobiDBLite consensus disorder prediction 275 374 - -
Gso9g1225 765 MobiDBLite consensus disorder prediction 188 225 - -
Gso9g1225 765 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 739 - -
Gso9g1225 765 MobiDBLite consensus disorder prediction 116 139 - -
Gso9g1225 765 MobiDBLite consensus disorder prediction 54 73 - -
Gso9g1225 765 MobiDBLite consensus disorder prediction 440 459 - -
Gso9g1225 765 MobiDBLite consensus disorder prediction 280 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1225 Gso-Chr9 35237677 35242047 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1225 112 738 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 34.488 1.36e-61 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1225 - - gmx:100795947 1471.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1603 16 36620758 36624925 Gso9g1225 9 35237677 35242047 GST
Gso9g1225 9 35237677 35242047 Gso20g1235 20 42357117 42362421 PCT
Gso9g1225 9 35237677 35242047 Gso10g2146 10 48487063 48491163 PCT
Gso20g1235 20 42357117 42362421 Gso9g1225 9 35237677 35242047 PCT
Gso10g2146 10 48487063 48491163 Gso9g1225 9 35237677 35242047 PCT