Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1224 ATGGCTCTTCTGCCATATTCAAAATGCAAATTTCTTTTTCCAATCATTTTCCTCTCCTTGACATTATCATCAATGTCACAAGCAGAGCTTGATGCTCACTACTATGATAAAACATGTCCACAAGCAGAGAAGATAATTTCAGACACTGTTCTCAGGGCTTCCACATTTGATCCAAAAGTTCCAGCTAGGATCTTAAGGATCTTCTTCCAAGACTGTTTCATAAGGGTATGTGATGCATCAATATTGCTGGACTCAACACCCAAAAACCTGGCTGAGAAAGATGGTCCTCCTAATCTCTCTGTCCATGCTTTCTATGTTATTGATGAAGCCAAGGCCAAGCTTGAGAAAGCTTGCCCTCGCACGGTTTCCTGTGCTGACTTAATAGCCATTGCGGCTAGGGATGTGGTAGCATTGTCTGGAGGACCATATTGGAATGTGCTAAAAGGAAGAAAAGATGGAAGGGTCTCAAAGGCATCTGAAACAGTCAACCTACCAGCTCCAACCCTAAATGTGAACCAACTCATTCAGAGCTTTGCAAAGAGAGGTTTAGGTGTCAAAGACATGGTGACTCTCTCTGGTGGCCACACTCTTGGCTTTTCACACTGTTCTTCTTTCCAAGCTAGAATTCACAACTTCAGTTTGTTGCATGACATTGACCCTAGTTTGAACACTGAGTTTGCACTAGACCTCAAAAAGAAGTGTCCAAAACCAAACACAAACTTCAGTGCTGGCCAGTTCCTGGACTCAACAGCATCAGTGTTTGACAATGACTACTATAGACAATTGTTGGTGGGAAAGGGTTTGTTCTCATCAGATCAGTCACTTGTTGGGGATCAGAGAACTAGTTGGATTGTTAAAGCATTTGCCAAGGACCAAAGTTTGTTCTTCAAAGAGTTTGCGGATTCAATGTTGAAACTTGGAAATGTGGGGGTGTCTGAAAATGGAGAAGTGAGACTTAATTGCAAGGTTGTGAATTGA 978 0.4223 MALLPYSKCKFLFPIIFLSLTLSSMSQAELDAHYYDKTCPQAEKIISDTVLRASTFDPKVPARILRIFFQDCFIRVCDASILLDSTPKNLAEKDGPPNLSVHAFYVIDEAKAKLEKACPRTVSCADLIAIAARDVVALSGGPYWNVLKGRKDGRVSKASETVNLPAPTLNVNQLIQSFAKRGLGVKDMVTLSGGHTLGFSHCSSFQARIHNFSLLHDIDPSLNTEFALDLKKKCPKPNTNFSAGQFLDSTASVFDNDYYRQLLVGKGLFSSDQSLVGDQRTSWIVKAFAKDQSLFFKEFADSMLKLGNVGVSENGEVRLNCKVVN* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1224 325 Gene3D - 33 325 - -
Gso9g1224 325 CDD secretory_peroxidase 29 324 IPR033905 GO:0004601|GO:0042744
Gso9g1224 325 PANTHER PEROXIDASE 66 11 324 - -
Gso9g1224 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Gso9g1224 325 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso9g1224 325 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso9g1224 325 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso9g1224 325 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso9g1224 325 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso9g1224 325 PANTHER PEROXIDASE 25-RELATED 11 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso9g1224 325 Gene3D Peroxidase, domain 2 165 306 - -
Gso9g1224 325 Pfam Peroxidase 56 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso9g1224 325 SUPERFAMILY Heme-dependent peroxidases 30 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso9g1224 325 ProSiteProfiles Plant heme peroxidase family profile. 29 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso9g1224 325 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso9g1224 325 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso9g1224 325 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso9g1224 325 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso9g1224 325 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso9g1224 325 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso9g1224 325 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso9g1224 325 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso9g1224 325 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1224 Gso-Chr9 35216452 35219260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1224 11 325 Peroxidase AT5G51890 69.304 5.25e-167 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1224 K00430 - gmx:100795422 650.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1602 16 36607628 36610634 Gso9g1224 9 35216452 35219260 GST
Gso9g1224 9 35216452 35219260 Gso10g2143 10 48464311 48465948 PCT
Gso10g2143 10 48464311 48465948 Gso9g1224 9 35216452 35219260 PCT