Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1219 ATGGGTAAGGGGGGAATGTCAATTGATGAACATGGAGAAGGCAAAGAAGAGAATATGGCTGCTTGGCTTGTTGGAATAAACTCTCTCAAGATTCAGCCTTTCAAGCTTCCTACTTTGGGACCCCATGATGTCAGAGTTAGAATGAAGGCTGTTGGTATTTGTGGGAGTGATGTTCACTACCTCAAGACACTGAGGTGTGCTCACTTTATAGTTAAAGAACCAATGGTTATTGGTCATGAGTGTGCTGGGATCATAGAAGAAGTTGGCAGTCAAGTGAAGAGTTTGGTGCCTGGTGACCGTGTGGCAATTGAGCCTGGGATCAGTTGTTGGCGTTGCGACCACTGCAAACAGGGTCGATATAACTTATGCGATGATATGAAGTTTTTTGCTACTCCACCAGTTCATGGTTCCCTGGCTAATCAGATAGTGCATCCTGCAGACCTATGTTTTAAGCTGCCAGACAACGTGAGCCTAGAGGAGGGAGCAATGTGTGAACCCTTAAGTGTTGGTGTTCATGCTTGTAGGAGAGCTAATATTGGACCAGAAACATATGTGTTAATCATGGGAGCAGGACCTATAGGACTTGTTACAATGCTTGCAGCTCGTGCTTTTGGGGCACCCAGGACTGTCATTGTGGATGTAGATGACTATCGTTTATCTGTTGCAAAATCACTTGGTGCCGATGACATTGTTAAAGTCTCAACAAACATTCAGGATGTGGCTGAAGAAGTTGTGCAGATACAGAAGGTTATGGGAGCTGATATAGATGTTACCTTTGATTGTGCTGGTTTTGACAAAACCATGTCTACAGCACTGAGTGCTACTCAGCCAGGTGGCAAAGTTTGTCTAGTGGGAATGGGACATTCTGAAATGACTGTCCCACTCACCCCAGCTGCAGCAAGGGAAGTTGATGTGCTTGGAGTTTTTCGCTATATGAACACATGGCCTCTTTGCCTTGAGTTTCTAAGGAGTGGAAAAATCGATGTAAAACCCCTTATAACTCATAGGTTTGGGTTTTCTCAAAAGGAAGTGGAAGAAGCCTTTGAAACAAGTGCTCGTGGTGGTAACGCCATCAAGGTTATGTTCAATCTTTAG 1095 0.4447 MGKGGMSIDEHGEGKEENMAAWLVGINSLKIQPFKLPTLGPHDVRVRMKAVGICGSDVHYLKTLRCAHFIVKEPMVIGHECAGIIEEVGSQVKSLVPGDRVAIEPGISCWRCDHCKQGRYNLCDDMKFFATPPVHGSLANQIVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETYVLIMGAGPIGLVTMLAARAFGAPRTVIVDVDDYRLSVAKSLGADDIVKVSTNIQDVAEEVVQIQKVMGADIDVTFDCAGFDKTMSTALSATQPGGKVCLVGMGHSEMTVPLTPAAAREVDVLGVFRYMNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFNL* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1219 364 PANTHER L-IDONATE 5-DEHYDROGENASE 13 364 - -
Gso9g1219 364 SUPERFAMILY GroES-like 18 190 IPR011032 -
Gso9g1219 364 Pfam Zinc-binding dehydrogenase 192 322 IPR013149 -
Gso9g1219 364 CDD sorbitol_DH 20 363 IPR045306 GO:0016616
Gso9g1219 364 PANTHER SORBITOL DEHYDROGENASE 13 364 - -
Gso9g1219 364 SMART PKS_ER_names_mod 25 362 IPR020843 GO:0016491
Gso9g1219 364 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 78 92 IPR002328 GO:0008270|GO:0016491
Gso9g1219 364 Gene3D - 29 350 - -
Gso9g1219 364 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 328 IPR036291 -
Gso9g1219 364 Pfam Alcohol dehydrogenase GroES-like domain 41 152 IPR013154 -
Gso9g1219 364 Gene3D - 169 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1219 Gso-Chr9 35139503 35144266 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1219 31 297 Monolignol Biosynthesis Gene Families AT4G37980 27.338 2.53e-18 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1219 K00008 - gmx:100791559 742.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso9g1219 9 35139503 35144266 Gso9g1219 9 35139503 35144266 ECH