Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1212 ATGGCACATGAGAGAGTTGATATCAGTGTTTTGGTTGTGGATAATGATGATACTTCTTTGGCCATTGTTGCTAATGTACTCAACTCATTAGGATACAAAGTTCTCTCTACCAACAGCGCCCTAAATGCTTTGGAGATTCTTAGAGAGTTCAGAGGCTTTATTGATCTTCTCATTACAGAACTTCATATATCTGGGATGAATGGATTTGAATTTCAAAAGTGTGTTGAAAATCAATTCCACATACCAGTGCTAATTATGTCTGCAGATGGAAGAAGTACTGTAATTTCCAAGAGTTTTGCAAATGGTGCAGCACAATATATTTTGAAACCCTTTTCTGCGGATGACTTCAAAGACATTTGGCGATATGCAAAGAAACTATCTATTCAAAATAATGAAGGGGGGTCAGTACCAGGTGATAACACTTCTATTCAGGATGTTAACTCAGCAACATCATCGAATATGAACAAGAGAAAAAGGAAGTATTGCCCAAGAATGAGTTCCCAAATGAATAAGGAAGGCCAAAGTGAAGAAAGCTCTAGGCTTGTAAAGAAACCAAAGGTTGTTTGGACAACATATCTTCACAACCGCTTTTTGCTTGCCATAAAACAAATTGGATTGGAGAAGGCTGTCCCAAAGACAATTGTTCGAGTCATGAATGTGCCAAACTTGACTAGAGAAAATGTTGCTAGTCACTTACAGAAATATCGCATATTCCTAAAAAAAGTAGCAGATAAAGGATTGCTTGAGGGCTTATCTAACAGAGATCTAAGGTCAAGGTTTGCCTCTGGCCTTTCAGCATCAATGATAAATGACATCCAAGCAAAACGTGAGAAATCTCGTGTTCCTGCACAACAATTTATAAAAAGAATAGAACATCAATCAGGTTATGGAGGAATAGCCAATGTTGTTAAACCTTACAACAATGTTTCAAGTGTGACTAACACTCCACTTGGAAGATTACATCAATTTCCCCATCCATGTCACAAAGGCTTGAACTTGAATACAATGCTTCACAACCAACGTCATGGTAGTTCTTCGAATCAAGCAAGACTTGGAGCACAATATTCAAGCTTTGGAAGCAATGCCAGGGCCAATAATATCCAGCAAAATATGTTGGGAAGCTATGCTAACCAACCATATTATGCACAAAGCTCTTACAACAATGCTGGTGTTGTCTTTCCATCAGATGGAGTAATGGGACATGGCTTGATGAATTTTACAAATGGCCTAAGAGGAGGTATGAACCATGGTGCCAACCAATTTATGTATCCAAACTATGGTTCATTTGGAAATAATCACAACTTAAGCAATGGTCAAGGAGTGTTTGCCTCTACTTCTAATGCTGGGGAGGGCTGTTCAAGGGAGCTTCCAAAAGAAAATATTCAAGGGAACCTAACACTGCCTCAACAACAACTACAGGGCAATGTTGCAGAAAATGATATTGGTACTTCAATTGGTGAGAACAATTTCAACCAGCTGAACGAAGATGACTTTTCTGATCTTTTCATGATGCTAGATGAAATGGATCTAAATGAGACTGGAGAGAACCATAATGCAAATGATTTTTTGAAGTCTGACTTTTCAATCTCTAATCACGCTGTGGAGTCCCTTGAAAAGATGGGAGGTGATGACGAACATGCGAACATGGAACCCTTGGACAGGTTCGTGATGAATGATGTTTCCTCAGGAAATAACTCGGCCACTGATGAGGATTGGGATTTTGAACTGATTGAAGCCCTGTTCGGTGAGGAGAAAAACCAGGGAGAATGA 1770 0.3915 MAHERVDISVLVVDNDDTSLAIVANVLNSLGYKVLSTNSALNALEILREFRGFIDLLITELHISGMNGFEFQKCVENQFHIPVLIMSADGRSTVISKSFANGAAQYILKPFSADDFKDIWRYAKKLSIQNNEGGSVPGDNTSIQDVNSATSSNMNKRKRKYCPRMSSQMNKEGQSEESSRLVKKPKVVWTTYLHNRFLLAIKQIGLEKAVPKTIVRVMNVPNLTRENVASHLQKYRIFLKKVADKGLLEGLSNRDLRSRFASGLSASMINDIQAKREKSRVPAQQFIKRIEHQSGYGGIANVVKPYNNVSSVTNTPLGRLHQFPHPCHKGLNLNTMLHNQRHGSSSNQARLGAQYSSFGSNARANNIQQNMLGSYANQPYYAQSSYNNAGVVFPSDGVMGHGLMNFTNGLRGGMNHGANQFMYPNYGSFGNNHNLSNGQGVFASTSNAGEGCSRELPKENIQGNLTLPQQQLQGNVAENDIGTSIGENNFNQLNEDDFSDLFMMLDEMDLNETGENHNANDFLKSDFSISNHAVESLEKMGGDDEHANMEPLDRFVMNDVSSGNNSATDEDWDFELIEALFGEEKNQGE* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1212 589 Pfam Response regulator receiver domain 10 118 IPR001789 GO:0000160
Gso9g1212 589 Gene3D - 181 243 - -
Gso9g1212 589 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 184 237 IPR006447 GO:0003677
Gso9g1212 589 PANTHER TWO-COMPONENT RESPONSE REGULATOR 8 524 IPR045279 GO:0009736
Gso9g1212 589 Gene3D - 2 130 - -
Gso9g1212 589 CDD REC_typeB_ARR-like 10 123 - -
Gso9g1212 589 PANTHER RESPONSE REGULATOR 23-RELATED 8 524 - -
Gso9g1212 589 SUPERFAMILY Homeodomain-like 182 241 IPR009057 -
Gso9g1212 589 MobiDBLite consensus disorder prediction 133 156 - -
Gso9g1212 589 ProSiteProfiles Response regulatory domain profile. 9 124 IPR001789 GO:0000160
Gso9g1212 589 SMART REC_2 8 120 IPR001789 GO:0000160
Gso9g1212 589 MobiDBLite consensus disorder prediction 133 178 - -
Gso9g1212 589 SUPERFAMILY CheY-like 8 129 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1212 Gso-Chr9 34949420 34956318 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1212 6 247 Response Regulator Gene Family AT4G31920 37.190 2.44e-46 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gso9g1212 Response_reg 1.3e-17 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1212 - - gmx:102662017 1182.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso9g1212 9 34949420 34956318 Gso9g1212 9 34949420 34956318 ECH