Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1202 ATGACACCATCACGAGTGGCAGGTGGATTAACCCAATCATCATCAAATTCTGGAATTTTCTATCAAGGAGACGGGCAGTCACAGAATGTAGTTGACTCTCACTTAAGCTCATCTTTTGTTAACTCGTCTAGTACGGTTCCAGGAGCTGGTCGTTCAAACCTCGGTCCGGTTTCTGGGGATATTAATAATGCAGTTTTGAACACTGTGGCAAACTCAGCACCAAGTGTTGGAGCCAGTTCTTTAGTCACGGATGCAAATTCTTCTCTCTCTGGTGGCCCCCATTTGCAGAGAAGTACCAGTGTTAACACAGACTCTTACTTACGATTACCTGCCTCACCTATGTCATTTACATCGAATAATATTAGTATTTCTGGCTCATCAGTGATGGATGGTTCATCTGTAGTACAGCAGAGCTCTCATCAAGATCAGAATGTTCAACAATTGCAGCAGAATAAGCAGCAGCCGCAGGGTGCTTCAAGTGCTACGTCTTTGCCTGCATCTCAAACCGGCCCTTCTACGCTCCAAATGGGTGCACAAGTCCCGGGATCTTTCATTCAAGATCCAAATAATATGTCTCACTTGTCGAAGAAAAATAGACTGGATACCAAACAGGAGGATATGACGCAACAACAGGTTATACAACAGCTTCTTCAGAGACAAGATTCCATGCAATTCCAGGGTCGTAATCCCCAGTTACAGGCTTTCCTTCAGCAGCAGCAGCAGCAGCAGCAGAGACTGAGACAACAACAGATGTTTCAGCAAATGCCACAATTACACCGAGCGCACTTGCAGCAGCAACAACAACAACAACAACAAATGCAATTGAGGCAGCAGCAGCAACAACAACAACAACAACAAGTGATGCAGCCCTCTTCTGCTGTCAAGCGGCCATATGAGAGTAGTGTTAGTGGGGTATGTGCCCGTCGATTGATGCAGTATCTCTATCATCAAAGGCAACGACCAAATGTGAGATATAGTATTGCCTATTGGAGAAAATTTGTGGCTGAATATTACTCTCTTCGTGCAAAGAAACGATGGTGCTTGTCATTATATAGTAATGTTGGGCATCATGCACTTGGTGTTTTTCCCCAAGCATCTATGGATGCATGGCACTGTGACATATGTGGTTCTAAATCTGGAAGGGGATTTGAGGCAACTTATGAAGTGTTACCTAGGCTTAATGAAATCAAATTTGGCAGTGGCGTAATTGATGAACTATTGTTTCTGGACATGCCACGTGAAATGAGATTCGCTTCTGGTGCAATGATGTTAGAATATGGAAAAGCAGTTCAAGAGAGTGTATATGAGCAGCTTCGTGTTGTTCGTGAAGGTCAACTTCGTATCATATTCACTCAAGACTTGAAGATATTATCTTGGGAGTTCTGTGCAAGGCGCCATGAAGAACTTCTTCCTCGAAGGTTGGTTGCACCACAGGTCAACCAGTTAGTTCAGGTAGCTAAAAAATGTCAAAGTACAATTGCTGAAAGTGGGTCTGATGGGGTTTCTCAACAAGACATTCAAACAAACGGCAACATGTTGTTGACAGCTGGGGGTCAGCTTGCGAAGATTTTGGAGATGCAATCACTAAATGAGTTGGGCTTTTCTAAAAGATATGTGAGATGTTTGCAAATTTCGGAAGTTGTCAATAGCATGAAAGACCTAATAGATATCTGTGCTGAGCACAAAATTGGGGCAATTGAGAGCTTAAAAAATTATCCTCGACTTGCGACAGCCTCAAAGCACCAGATGCAAAAGATGCAGGAAATGGAACAGCTAGGAAATGTTCAATGTCTGCCAACTGATCAAAACACACTCAATAAGCTAATGGCTCTGAATCCTGGATTGAACAACCATATAAACAACTCTCATAATATGGTAAATCGTGGTGCTTTGAGTGGGTCAGCCCAAGCAGCTTTAGCACTGAACAACTACCAAAATCTTCTCATGAGGCAAAATTCAACGAATTCTAGCCCTGGCTCACTTCAGCGGGAAGGGTCCTCTTTCAATAATTCAAACCAGAGTCCCTCTTCAGCTTTGCAAGGAGCTAGTCCTGCTTTAATTTCAGGCTCAATGCAGAATTCATCTGTTAGTGGTTTCCCAAGTCCCCATCTACCCCCACAGCAGCAGCAACACCACCTACAACAGCGCTCATTAAGTTCAAATGCTTTACTGCAACAAAATCATCATGGTTCCCAAGGAAATCAAGCTCTACAGCAGCAGCAGATGATCCATCAACTGCTGCAGGAGATGTCAAATAACAATGGGGGAATGCAACCACTGTCTCTTGGTGGACCCAATGCAAAGAATGCAATGGGTTTTGGAGGCCATACTCCATCCTTAAGCGGAGGTTCTGCCAATGTTCCTCCATCCTTAAGCGGAGGTTCTGCCAATGTTCCAGGAAACAATGGACCTATGTCAAGGATTAATAGCTTCAAAACAGCTTCAAATAGTGATTCTTCTGCAGTTGGTGGCAACAATCGATTCAACCAGAGAACATCTGACATGCCACAACATTTGCAAAATGTGGTTCAGGATATTGGCAATGAATTCACGGATAATCCCTTCTTAAACAGTGATCTTGATGATAACATGGGTTTTGGCTGGAAGGCATGA 2613 0.4351 MTPSRVAGGLTQSSSNSGIFYQGDGQSQNVVDSHLSSSFVNSSSTVPGAGRSNLGPVSGDINNAVLNTVANSAPSVGASSLVTDANSSLSGGPHLQRSTSVNTDSYLRLPASPMSFTSNNISISGSSVMDGSSVVQQSSHQDQNVQQLQQNKQQPQGASSATSLPASQTGPSTLQMGAQVPGSFIQDPNNMSHLSKKNRLDTKQEDMTQQQVIQQLLQRQDSMQFQGRNPQLQAFLQQQQQQQQRLRQQQMFQQMPQLHRAHLQQQQQQQQQMQLRQQQQQQQQQQVMQPSSAVKRPYESSVSGVCARRLMQYLYHQRQRPNVRYSIAYWRKFVAEYYSLRAKKRWCLSLYSNVGHHALGVFPQASMDAWHCDICGSKSGRGFEATYEVLPRLNEIKFGSGVIDELLFLDMPREMRFASGAMMLEYGKAVQESVYEQLRVVREGQLRIIFTQDLKILSWEFCARRHEELLPRRLVAPQVNQLVQVAKKCQSTIAESGSDGVSQQDIQTNGNMLLTAGGQLAKILEMQSLNELGFSKRYVRCLQISEVVNSMKDLIDICAEHKIGAIESLKNYPRLATASKHQMQKMQEMEQLGNVQCLPTDQNTLNKLMALNPGLNNHINNSHNMVNRGALSGSAQAALALNNYQNLLMRQNSTNSSPGSLQREGSSFNNSNQSPSSALQGASPALISGSMQNSSVSGFPSPHLPPQQQQHHLQQRSLSSNALLQQNHHGSQGNQALQQQQMIHQLLQEMSNNNGGMQPLSLGGPNAKNAMGFGGHTPSLSGGSANVPPSLSGGSANVPGNNGPMSRINSFKTASNSDSSAVGGNNRFNQRTSDMPQHLQNVVQDIGNEFTDNPFLNSDLDDNMGFGWKA* 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1202 870 MobiDBLite consensus disorder prediction 127 194 - -
Gso9g1202 870 MobiDBLite consensus disorder prediction 779 834 - -
Gso9g1202 870 Coils Coil 263 285 - -
Gso9g1202 870 MobiDBLite consensus disorder prediction 1 25 - -
Gso9g1202 870 MobiDBLite consensus disorder prediction 127 193 - -
Gso9g1202 870 MobiDBLite consensus disorder prediction 751 834 - -
Gso9g1202 870 PANTHER LIM DOMAIN-BINDING PROTEIN 5 151 IPR029005 -
Gso9g1202 870 PANTHER LIM DOMAIN-BINDING PROTEIN 161 869 IPR029005 -
Gso9g1202 870 MobiDBLite consensus disorder prediction 650 716 - -
Gso9g1202 870 Pfam LIM-domain binding protein 309 570 IPR029005 -
Gso9g1202 870 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 5 151 - -
Gso9g1202 870 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 161 869 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1202 Gso-Chr9 34650869 34658520 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1202 304 574 C2H2 Transcription Factor Family AT1G43850 58.672 5.61e-103 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1202 - - gmx:100789452 1393.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1584 16 36383980 36390826 Gso9g1202 9 34650869 34658520 GST