Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1163 ATGCTTGAATTGAGTGAATCCCACTCCAAAAACTTGCACTTTCCCCTCACTCACATCATTCTCTTCTTCACATGTTTCAAACTTTCTAAAGCACAATCCTCCATGGAGCCAGTTCCCACCTACATCACCCACCACAGCTGGGAGCCTTCCGTCGCCATCACCGTCGGCGCCATCATCATCGCCCTCCTCTTAATGGGAATCATCTCAATCTACCTTCGCCGCTGCGCCGAGTCTCACATCATCATCACCACAACCCAAACCACCACCACCCTACCGTGCTCCTGCGCGCAGGGGATCAACAGGGAGCTCCTCAACACGTTCCCAACGCTCTTCTACTCCAACATCAAGGATCTCAAGAAGGGGAACGAAACGCTCGAATGCGCGGTTTGTTTAACAGATTTCACTGACAAAGACGCGCTTAGGCTGCTCCCCAAATGCAATCACGTGTTCCACCCTCACTGCATTGATTCCTGGCTCGCGTGTCACGTGACATGCCCGGTTTGTCGCGCGAATCTCAGCCAGGAATCCTCCCATGTTTCCATAACCGTCCCTCCTCATAACGAGGAAGAGGGTTCCAGAAACACAACAACAAACGAAGCTACCCAAATTGAGCAAAGTACAAGCAATGACGTTGGTCAAGTTTGTCTTGGAGATCCTACACCGACCAGTGATGCGGCTAAAATAATGTATATAAGTGAAGAGCAGCAACAGCAACACTCGTCTTCCGAGCCGACTTTTGAAGTTGAGTTAGACCCAAACACAAATTCTACTACTACTACTATTAACAATAATGGTGGCGATGGGGTTGTTGTTGTGTCCGAGAGGAACCTTTCGAGGTCGAACTCGACGGGGCATTGCATTGTGGAGGAGCAAGGGAAGGGTGTGGAGAGGTACACGTTGAGGTTGCCCGAAGATGTGAGGAGGTACATTCTGGTGAACCATGGGAGGAGTGTTCAACGTTCCGCGAGTGTTAAGGGGGTGTGTTGGAGTGATAGTGAAGAGAGTTATAAGGGAAAGAGGGTCAATGGAGAGGTGAGGGTGGAGAAGAGGTGGGTGATCTGCACACCACCATTTGTGGGACATGGCTGA 1089 0.5051 MLELSESHSKNLHFPLTHIILFFTCFKLSKAQSSMEPVPTYITHHSWEPSVAITVGAIIIALLLMGIISIYLRRCAESHIIITTTQTTTTLPCSCAQGINRELLNTFPTLFYSNIKDLKKGNETLECAVCLTDFTDKDALRLLPKCNHVFHPHCIDSWLACHVTCPVCRANLSQESSHVSITVPPHNEEEGSRNTTTNEATQIEQSTSNDVGQVCLGDPTPTSDAAKIMYISEEQQQQHSSSEPTFEVELDPNTNSTTTTINNNGGDGVVVVSERNLSRSNSTGHCIVEEQGKGVERYTLRLPEDVRRYILVNHGRSVQRSASVKGVCWSDSEESYKGKRVNGEVRVEKRWVICTPPFVGHG* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1163 362 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 100 179 IPR013083 -
Gso9g1163 362 SMART ring_2 127 168 IPR001841 -
Gso9g1163 362 Pfam Ring finger domain 126 169 IPR001841 -
Gso9g1163 362 ProSiteProfiles Zinc finger RING-type profile. 127 169 IPR001841 -
Gso9g1163 362 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 333 - -
Gso9g1163 362 PANTHER RING FINGER DOMAIN-CONTAINING 1 333 - -
Gso9g1163 362 MobiDBLite consensus disorder prediction 236 257 - -
Gso9g1163 362 MobiDBLite consensus disorder prediction 181 215 - -
Gso9g1163 362 CDD RING-H2_EL5_like 126 169 - -
Gso9g1163 362 SUPERFAMILY RING/U-box 110 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1163 Gso-Chr9 33290378 33292161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1163 19 359 Rapid Response to Elicitors AT3G05200 31.304 1.33e-48 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1163 K10664 - gmx:100782532 701.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1559 16 36153060 36154596 Gso9g1163 9 33290378 33292161 GST