Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1137 ATGGATACTCCAATGACCCTCACGGGCTTGCTCCGCGACGTCGCCGCCAAATTCCCTTCCCGCCGCGCCATCTCCGTCGCCGGAAAATTCGACCTCACCCACTCCCGCCTCCATCAACTGGTTGAATCCGCCGCCGCCCGCTTAGTCGCCGCCGGAATCAAACCCGGCGACGTCATCGCTCTCACCTTCCCCAATACCGTCGAGTTTGTTGTCTTGTTTCTAGCCGTCATTCGAGTGCGCGCCACAGCCGCGCCGTTAAACGCGGCTTACACAGCCGAAGAGTTTGAGTTTTACTTGTCCGACTCCGAGTCCAAGCTTCTTCTAACATCAGCAGAAGGAAACAACTCAGCTCAAGCCGCAGCTTCAAAACTCAACATCCTTCACAGCACAGCTTCAATAACCCAAGCCGAAGACAAAGAAGCCGAGCTGAGCCTCTCATTAAGCCACTCCGAGTCAGAGTCAATTAACTCGGTTGAGTCACTCGGAAACGATCCAGATGACGTGGCGCTTTTCCTTCACACCTCCGGCACCACGAGCCGACCCAAGGGAGTGCCTTTGACGCAACACAACCTGTTCTCTTCCGTGAACAACATTAAATCGGTGTACCGACTCACTGAGTCCGACTCGACGGTGATCGTTCTTCCTTTATTCCACGTGCACGGTTTGATCGCGGGGCTCCTGAGTTCGCTCGGCACCGGGGCGGCGGTGGCGCTGCCGGCGGCGGGGAGATTCTCCGCCTCGTCATTCTGGAAGGACATGATTAAATACAGCGCCACGTGGTACACAGCGGTTCCTACAATACACCAGATCATACTGGACCGCCACTCGAACAGCCCCGAACCGGTTTACCCGCGCCTCCGGTTCATTCGAAGCTGCAGCGCGTCGCTCGCACCGGCTATTCTGGGTAAACTTGAGGAGGCCTTCGGTGCGCCAGTGCTGGAGGCTTACGCGATGACGGAAGCGTCGCATTTGATGGCTTCGAACCCTTTGCCGCAAGATGGGCCCCACAAGGCCGGGTCGGTTGGGAAACCCGTGGGTCAAGAAATGGTTATATTGGACGAAACGGGTCGGGTTCAAGATGCTGAAGTTAGTGGAGAGGTTTGCATTAGGGGTCCTAATGTTACGAAGGGATATAAAAATAACGTGGATGCCAATACGGCGGCGTTTTTGTTTGGTTGGTTTCACACCGGTGATGTTGGGTACTTGGATTCTGATGGGTATTTGCATCTCGTGGGTCGGATCAAGGAGCTCATCAACCGAGGAGGAGAAAAGATATCACCAATAGAAGTGGATGCTGTCCTTCTTTCACACCCAGACATTGCTCAGGCAGTTGCTTTTGGAGTGCCTGATCCAAAGTATGGGGAGGAGATATACTGTGCTGTAATCCCAAGAGAAGGATCAGACATTGATGATGCAGAGTTGCTAAGATATTGCAAGAAGAATCTTGCATCTTTCAAAGTCCCCAAAAAGGTCTTCATTACCGATTCTTTGCCCAAGACTGCCACCGGAAAGATTTTGCGTCGTCTTGTGGCAGAACACTTTGTCTCTCAAATTTGA 1557 0.5331 MDTPMTLTGLLRDVAAKFPSRRAISVAGKFDLTHSRLHQLVESAAARLVAAGIKPGDVIALTFPNTVEFVVLFLAVIRVRATAAPLNAAYTAEEFEFYLSDSESKLLLTSAEGNNSAQAAASKLNILHSTASITQAEDKEAELSLSLSHSESESINSVESLGNDPDDVALFLHTSGTTSRPKGVPLTQHNLFSSVNNIKSVYRLTESDSTVIVLPLFHVHGLIAGLLSSLGTGAAVALPAAGRFSASSFWKDMIKYSATWYTAVPTIHQIILDRHSNSPEPVYPRLRFIRSCSASLAPAILGKLEEAFGAPVLEAYAMTEASHLMASNPLPQDGPHKAGSVGKPVGQEMVILDETGRVQDAEVSGEVCIRGPNVTKGYKNNVDANTAAFLFGWFHTGDVGYLDSDGYLHLVGRIKELINRGGEKISPIEVDAVLLSHPDIAQAVAFGVPDPKYGEEIYCAVIPREGSDIDDAELLRYCKKNLASFKVPKKVFITDSLPKTATGKILRRLVAEHFVSQI* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1137 518 SUPERFAMILY Acetyl-CoA synthetase-like 4 516 - -
Gso9g1137 518 ProSitePatterns Putative AMP-binding domain signature. 171 182 IPR020845 -
Gso9g1137 518 CDD FACL_fum10p_like 19 512 IPR045310 GO:0016874
Gso9g1137 518 Gene3D - 414 516 IPR045851 -
Gso9g1137 518 Gene3D - 5 413 IPR042099 -
Gso9g1137 518 Pfam AMP-binding enzyme 12 420 IPR000873 -
Gso9g1137 518 Pfam AMP-binding enzyme C-terminal domain 429 504 IPR025110 -
Gso9g1137 518 PANTHER ACYL-COA SYNTHETASE 1 518 - -
Gso9g1137 518 PANTHER OXALATE--COA LIGASE-LIKE 1 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1137 Gso-Chr9 32677968 32682493 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1137 2 518 Monolignol Biosynthesis Gene Families AT4G05160 29.333 2.05e-58 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1137 K22133 - gmx:100779306 998.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso9g1137 9 32677968 32682493 Gso20g1278 20 42825004 42828892 PCT
Gso20g1278 20 42825004 42828892 Gso9g1137 9 32677968 32682493 PCT