Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1133 ATGGACCAAAAAGTTGGTCCAACTGAAATTTTGAAGAGGGATACTTTTCTTGGTAACTGGGGTATGTTGACAGAAGGTTCTCAACTACTCAAGCAAGGAGACTATTTATGGTGTGTTGGATATTGGCAGGTACTATTTGTTTGGCTCAGCTTTTTCTCTGCATTGCAAAGTAAAGTAACCAATTTAGATTTGAAGGCACAAGATTTTGATATGGATGGAACTATTGGGTTATTTGAAGAGCTTGACATTGATCAGTCTGGTTCAGTATTTATGAGGAACTGGAATGCCAAATTTGGTGGGCATTTATTGATCAGCTTGATTGAAGAATGGTGTGACAACAACAACTTCAAACTTCCTAAAAAATACAATTCTTCACATCAAGAAACCTATCCTATAGATAGCAAAGAGGAAATTCCAGCTTTGGTTGAAAGCCTATCATCTATTCATTTAGAAGAGCAGACAATAGCAATGGAGAAGATACATATGCTATCAAAGGAAATTCAGGAGAATAGGGTTTTCGTTGCTGAACATGGAGGAATACCACCACTAGTGCAACTCTTGTGCTATCCAGATTCAAAAATACAAGAACATGCAGTGACAACACTTTTGAATTTATCAATTGATGAGGGTAACAAGAGTCTTATATCCACAAAAGGTGTCATTCCAACTATCATAGAAGTTTTGGAGAATGGTAGTTATGTGGCTAAGGAGAACTCAGCCGTAGCTTTATTGAGCTTGTTAATGCTTGATGAGATTAAAGATATTGTTGGTCAATCAAATGGGTTCCCACCTTTGGTGGATTTGTTAAGGAATAGAACAATTACAAGGAAGAAAGATGTTGTGACAGCTATTTTTAACTTATCTATCAACCATGCAACTAAAGTACTGCATATTAGAGCTGGCATTATCGCACCATTGCTTCAATTGCTGAAGGACCCAAACTTGAGAATGATAGATGAGGCTCCCTCCATTTTGTTACTCCTTATATCAAATTCAGAAGCAAGAGAAGAGATTGGACAAATTAGTTTCATTGAAACCCTTGTTGAGTTCATGAGAGAAGGGAGTACATGGGGAGAATGTAATCCAGAAAATTTGAAAAGCATGAAAGAAAACTCATGA 1119 0.3691 MDQKVGPTEILKRDTFLGNWGMLTEGSQLLKQGDYLWCVGYWQVLFVWLSFFSALQSKVTNLDLKAQDFDMDGTIGLFEELDIDQSGSVFMRNWNAKFGGHLLISLIEEWCDNNNFKLPKKYNSSHQETYPIDSKEEIPALVESLSSIHLEEQTIAMEKIHMLSKEIQENRVFVAEHGGIPPLVQLLCYPDSKIQEHAVTTLLNLSIDEGNKSLISTKGVIPTIIEVLENGSYVAKENSAVALLSLLMLDEIKDIVGQSNGFPPLVDLLRNRTITRKKDVVTAIFNLSINHATKVLHIRAGIIAPLLQLLKDPNLRMIDEAPSILLLLISNSEAREEIGQISFIETLVEFMREGSTWGECNPENLKSMKENS* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1133 372 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 178 220 IPR000225 GO:0005515
Gso9g1133 372 SUPERFAMILY ARM repeat 135 356 IPR016024 -
Gso9g1133 372 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 15 103 356 - -
Gso9g1133 372 Gene3D - 110 368 IPR011989 -
Gso9g1133 372 PANTHER U BOX DOMAIN-CONTAINING 103 356 - -
Gso9g1133 372 Pfam Armadillo/beta-catenin-like repeat 168 206 IPR000225 GO:0005515
Gso9g1133 372 SMART arm_5 249 289 IPR000225 GO:0005515
Gso9g1133 372 SMART arm_5 167 207 IPR000225 GO:0005515
Gso9g1133 372 SMART arm_5 290 330 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1133 Gso-Chr9 32436798 32439485 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1133 103 360 U-box Gene Family AT5G42340 59.459 5.96e-78 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1133 - K08332 gmx:102664031 740.339