Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1132 ATGGAGTTCTCATCAGCAGTTGCCTTCATCTTTTCTATTTTACCTCTTCTTTTGCTCTTGAAACTAACGTTTTCTTGGTGGGTTTCACCAATCCTGAACCATCTTAAGCTTAAAAGATGTGGGTTTGGAGGGCCACTCCCAAGTTTTCCTCTTGGAAACATTCAAGAGATGAAAAAGAAGAATAGCCTGAGTTCTTCATTAGGGTCCTCTAATCTCACCCATGATATACACTCCACTGTCTTCCCCTATTTTTCTCGCTGGCAAAACTCTCACGGGAAGGTGTTTATCTATTGGCTTGGTACAGAACCGTTTTTGTACATTGCAGATCCAGAATTCTTGAAAAAAATGTCCACTGAGGTCTTGGCCAAGAGATGGGGAAAACCTAGAGTGTTTAGACACGATAGAGATCCTATGTTTGGAAATGGTTTGGTTATGGTTGAAGGCAATGAATGGGTTAGTCACCGACATGTTATAGCACCAGCATTTTCTCCTCTTAATTTGAAGGCAATGGCAAGCATGATGACAGAGTCTACAAATCAAATGATAGATAGGTGGATTGCACAAATCAACTCCGGCAACCCCAAAATCGATGTCGAAAGAGAGGTTGTAGAAACGGCCGGAGAAATCATTGCAAAAACAAGCTTTGGCATGAAGGGAAAAAATGCAAAGGAAGTGTCTGAAAAACTACGTGCCCTACAAATGACACTTTTTAAGACAACAAGATATGTAGGTGTTCCATTTGGCAAGTGTTTCAACGTCAAGAAAACCCTAGAGGCCAAGAAGCTTGGGAAAGAGATTGACAAGCTATTGTTATCCGTCATAACATCTCGTATGAAATCAATCAAAAGGCAAACTCAAGAAGACTTGTTGGGATTGTTGTTGCAAGGAAACAATAATCATCAAGATGATGGCAAGTTAGGGAAGACATTCACCACTAGAGACTTGTTGGATGAGTGCAAGACTTTCTTCTTTGCTGGCCATGAAACAACGGCATTGGCTATCTCATGGACGTTGTTTCTTCTAGCTATGCATGAAGATTGGCAAATCCAGTTAAGAGATGAGATAAGAGAAGTGGTCGGTGATAAAGAACTTGATATCAACACGCTTGCGGGGCTTAGAAAGATGAAGTGGGTGATGAATGAAGTTCTAAGACTCTACCCAACGGCACCAAATGTTCAAAGGCAAGCAAGAGAAGACATTCAAGTTGATAACTTAACAGTGCCTAATGGGACCAACATGTGGATCGATGTTGTGGCCATGCATCATGACCCGGCATTGTGGGGAAAAGATGTCAACGAGTTTAGACCAGAGAGGTTCATGAATGATGTCAATGGTGGATGTAACCACAAAATGGGGTACTTGCCTTTTGGTTTTGGAGGGAGAATGTGTGTTGGTAGGAACTTGAGCTTTATGGAGTATAAGATAGTTCTAACCCTACTCCTCTCTAGGTTTAGTTTCAAAGTTTCACCAGGTTATAACCATGCACCCTCTATCATGCTATCCCTTAGGCCCACTTATGGACTTCTTCTCATAGTTCAACCCCTTTAG 1548 0.4167 MEFSSAVAFIFSILPLLLLLKLTFSWWVSPILNHLKLKRCGFGGPLPSFPLGNIQEMKKKNSLSSSLGSSNLTHDIHSTVFPYFSRWQNSHGKVFIYWLGTEPFLYIADPEFLKKMSTEVLAKRWGKPRVFRHDRDPMFGNGLVMVEGNEWVSHRHVIAPAFSPLNLKAMASMMTESTNQMIDRWIAQINSGNPKIDVEREVVETAGEIIAKTSFGMKGKNAKEVSEKLRALQMTLFKTTRYVGVPFGKCFNVKKTLEAKKLGKEIDKLLLSVITSRMKSIKRQTQEDLLGLLLQGNNNHQDDGKLGKTFTTRDLLDECKTFFFAGHETTALAISWTLFLLAMHEDWQIQLRDEIREVVGDKELDINTLAGLRKMKWVMNEVLRLYPTAPNVQRQAREDIQVDNLTVPNGTNMWIDVVAMHHDPALWGKDVNEFRPERFMNDVNGGCNHKMGYLPFGFGGRMCVGRNLSFMEYKIVLTLLLSRFSFKVSPGYNHAPSIMLSLRPTYGLLLIVQPL* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1132 515 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso9g1132 515 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso9g1132 515 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso9g1132 515 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso9g1132 515 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso9g1132 515 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso9g1132 515 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso9g1132 515 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso9g1132 515 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso9g1132 515 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso9g1132 515 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso9g1132 515 SUPERFAMILY Cytochrome P450 74 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso9g1132 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Gso9g1132 515 Gene3D Cytochrome P450 31 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso9g1132 515 PANTHER CYTOCHROME P450 FAMILY MEMBER 7 510 - -
Gso9g1132 515 PANTHER CYTOCHROME P450 FAMILY 72 PROTEIN 7 510 - -
Gso9g1132 515 Pfam Cytochrome P450 79 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1132 Gso-Chr9 32420185 32423962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1132 10 515 Cytochrome P450 AT5G52400 59.180 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1132 - - gmx:100784128 1010.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1505 16 35304253 35308049 Gso9g1132 9 32420185 32423962 GST
Gso9g1132 9 32420185 32423962 Gso20g1282 20 42878151 42881487 PCT
Gso9g1132 9 32420185 32423962 Gso10g2096 10 47939193 47942789 PCT
Gso20g1281 20 42866089 42868756 Gso9g1132 9 32420185 32423962 PCT
Gso10g2097 10 47957126 47959409 Gso9g1132 9 32420185 32423962 PCT