Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1122 ATGTCAGAGTCCAAGGATGAAAATCCTGACCTTCCTCCCAAGTCAAAGCCACAGGAGGAACATGGTTTTGCCATGGATTTTGACATTAGCCTGGAAAGTCTATGGCCCTCGGATCATATATCTTTGGTCTCTAACCCCATGTCTCCTTTTCTCTTTTCCACTATCTCTGACCAACCTTGTTCTCCTGTCTGGGCTTTTTCTGATGCCGAAGATGAGAGGCTAATCAGGATTGCAGCTTCAGCAGGTAATACAAATACAACAACTGAAAATCTAGTTGAAAATTATGACAACAAAAAAACTGTGCCACCCCTTGTAGCCATCCCAACTTCAGAAAATCCAGATGCTTATTGTCTAATCAAGGAAAGAATGACACAAGCGCTTCGCCACTTCAAAGAGTTGACTGAACAAAATGTTCTAGCTCAGGTTTGGGCACCTATGAGGAATGGAAATCGGTATGCACTTACAACTTCAGGCCAACCATTTGTTCTTGATCCACATAGTAATGGACTCCATCAGTATAGAACAGTTTCCCTGATGTATATGTTCTCTGTGGATGGGGAGAATGATGAGATCATGGGACTTCCCGGCCGAGTTTTTCAGCAAAAAATTCCAGAATGGACTCCCAATGTTCAGTTTTATTCTAGTAAAGAGTATCAGCGCCTAAATCACGCGCAACATTACAATGTCCGCGGAACCTTGGCCCTGCCTGTGTTTGAGCTTGCAGGACAGTCATGTGTGGCTGTAGTGGAGTTGATAATGACTTCACAGAAGATTAACTATGCTCCTGAGGTTGATAAAATCTGCAAAGCCCTTGAGGCGGTTAAGTTGAGGAGTTCAGAAATTTTGGAGCATCAATACATTCAGATATGTAACGAAGACCGCCAGTATGCATTAGCCGAGATTTTGGAGATACTGACAGTTGTGTGTGAAACTCATAGTTTGCCTCTGGCACAAACATGGGTTCCATGTAAGCATCGGAGTGTCTTAGCACATGGCGGTGGTCATAAGAAAAGTTGCTCAAGTTTTGATGGATGTTGCATGGGGCAAGTTTGCATGTCTATAACTGAGGTAGCATTCTATGTAATAGATGCTCATACATGGGGTTTTCATGAGGCCTGTGTTGAGCATCACTTACAACAAGGTCAAGGAGTTGCTGGGAGGGCATTTTTGTCCCACAACATGTGCTTCTGTGGAAACATCGCCCAATTCTGCAAAACTGAATATCCCTTAGTACATTATGCACTCATGTTTGGTTTAACCAGCTGTTTTGCAGTATGCTTACAAAGCTCTCATACCGGAAATGATGATTATGTGCTAGAGTTTTTTCTGCCTCCTGGGATCACAGACTTTAATGAACAAAAAAGATTGTTGGGATCCATATTGGCAACAATGAAGCCACATTTTCAGAGTCTTAAGATTGCTTCTGGCATTGAACTTGAGGAAAATGCTTCAATTGAAATCATAGAAGCAAGAAATGAAAGAGTTAATTTGAGGTTTGAGTCCATTCCAATTACTCAATCTTCTAAGTCACCACCTAGACATGCCTCGCCAAATGTGGGGGAGGGGCTGCCACTGGAGCCATCAGAACAGAAAATAATGGCATACTTTGATGGTATAAATGATGGAGGGAGTCTTGGTGATAATGCAGGTGGACACATTGATCAGAACACTTCCTTAAAGATCAAAACCAAAAAGAAACCCTCAGAGAGAAAACGTGGAAAAGCTGAGAAATCAATTAGTCTTGATGTTTTGCAACATTACTTCACAGGAAGCCTTAAGGATGCTGCAAAGAGCCTTGGTGTTTGCCCTACTACAATGAAGCGCATCTGTAGGCAGCATGGGATATCACGCTGGCCATCTCGAAAGATAAAAAAGGTTAACCGTTCCCTGTCCAAGCTCAAGTGTGTTATTGAATCAGTCCATGGTGCTGAACGAGCATTTGGTTTGAATTCTCTAAGTACCGTTTCACTTCCCATTGCTGCCGGTTCCTTTTCTGAGCCATCCACTTCAAACAAGTTCAACCGCCAAACATCATTGACCATTAGGCCATCGGAACCTAAGATCAATGAAAAGGATTTTGATGCGTCTGGAGCATCAGAAACAAAAAGGCAGGCTGCAATGGAAGATCAATTCCTTGGACTTGAAGCAAGGGCACAAAGTCCTGAGAAAGTGATTAATGATAGAGGAGTGGCCACTCAGGAGATTGGCACTAAAGGCACAAACAAGTTTAGAACTGGAAGTGGCTCAAGTGAAAGCAGTGGAAATCCTACTCCTCATGGTTCATGCCATGGTAGTCCCCCAAATGAAATCTCACCTCCTAAAGATATATTTGTAACAGGCCACAGTGAGAAATGTCTTGTGTTAAGAGGATCACTGGGGTCAACAACACTGCACTCAACTAGTACACCGAACTGCACAACTGCATACCCTATGCCTCACATTGTAGAAACGACAGAACCTCAAGAACTATTTGGAGGACAGCTACTTGAGCGTGCTGGTAGTTCTAAAGACTTGAGAAATCTATGCCCTTCAGCAGATGCTGTTTTGGAGGATCAGGTTCCAGAAGCTTACAAGATGAATCCTCAATGTTCTGACTTGCCTCAAATGCAACACATGGATAACCTTAATAACACTCTGACACCTTTTGCAGTTAGGAAAGAGGTGAAGAGTGTGACTATTAAGGCAACATATAAAGAAGATATCATAAGGTTTAAGGTCTCTATGGACTGTGGTATTGTGGAACTGAAAGAGGAAATTGCCAAAAGATTGAAACTAGAGGCGGGAACATTTGATATCAAGTATCTGGATGATGATCATGAATGGGTTTTGATAGCCTGTGATGCAGACCTGCAGGAGTGCATGGACATCTCAAGATCATCAGGCAGCAACGTAATCAGGCTTGTGGTGCATGATATACTGCCCATTCTCGGAAGCTCTTGTGAGAGCTCAGGAGATTGGAAAGGTTGTATATAG 2973 0.4282 MSESKDENPDLPPKSKPQEEHGFAMDFDISLESLWPSDHISLVSNPMSPFLFSTISDQPCSPVWAFSDAEDERLIRIAASAGNTNTTTENLVENYDNKKTVPPLVAIPTSENPDAYCLIKERMTQALRHFKELTEQNVLAQVWAPMRNGNRYALTTSGQPFVLDPHSNGLHQYRTVSLMYMFSVDGENDEIMGLPGRVFQQKIPEWTPNVQFYSSKEYQRLNHAQHYNVRGTLALPVFELAGQSCVAVVELIMTSQKINYAPEVDKICKALEAVKLRSSEILEHQYIQICNEDRQYALAEILEILTVVCETHSLPLAQTWVPCKHRSVLAHGGGHKKSCSSFDGCCMGQVCMSITEVAFYVIDAHTWGFHEACVEHHLQQGQGVAGRAFLSHNMCFCGNIAQFCKTEYPLVHYALMFGLTSCFAVCLQSSHTGNDDYVLEFFLPPGITDFNEQKRLLGSILATMKPHFQSLKIASGIELEENASIEIIEARNERVNLRFESIPITQSSKSPPRHASPNVGEGLPLEPSEQKIMAYFDGINDGGSLGDNAGGHIDQNTSLKIKTKKKPSERKRGKAEKSISLDVLQHYFTGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKIKKVNRSLSKLKCVIESVHGAERAFGLNSLSTVSLPIAAGSFSEPSTSNKFNRQTSLTIRPSEPKINEKDFDASGASETKRQAAMEDQFLGLEARAQSPEKVINDRGVATQEIGTKGTNKFRTGSGSSESSGNPTPHGSCHGSPPNEISPPKDIFVTGHSEKCLVLRGSLGSTTLHSTSTPNCTTAYPMPHIVETTEPQELFGGQLLERAGSSKDLRNLCPSADAVLEDQVPEAYKMNPQCSDLPQMQHMDNLNNTLTPFAVRKEVKSVTIKATYKEDIIRFKVSMDCGIVELKEEIAKRLKLEAGTFDIKYLDDDHEWVLIACDADLQECMDISRSSGSNVIRLVVHDILPILGSSCESSGDWKGCI* 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1122 990 MobiDBLite consensus disorder prediction 717 776 - -
Gso9g1122 990 MobiDBLite consensus disorder prediction 1 20 - -
Gso9g1122 990 ProSiteProfiles PB1 domain profile. 890 972 IPR000270 GO:0005515
Gso9g1122 990 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 3 985 - -
Gso9g1122 990 MobiDBLite consensus disorder prediction 665 684 - -
Gso9g1122 990 Pfam PB1 domain 891 971 IPR000270 GO:0005515
Gso9g1122 990 ProSiteProfiles RWP-RK domain profile. 563 646 IPR003035 -
Gso9g1122 990 SMART PB1_new 890 972 IPR000270 GO:0005515
Gso9g1122 990 MobiDBLite consensus disorder prediction 665 703 - -
Gso9g1122 990 MobiDBLite consensus disorder prediction 733 764 - -
Gso9g1122 990 MobiDBLite consensus disorder prediction 546 576 - -
Gso9g1122 990 Pfam RWP-RK domain 579 626 IPR003035 -
Gso9g1122 990 SUPERFAMILY CAD & PB1 domains 890 975 - -
Gso9g1122 990 MobiDBLite consensus disorder prediction 503 524 - -
Gso9g1122 990 CDD PB1_NLP 891 971 IPR034891 -
Gso9g1122 990 Gene3D - 887 974 - -
Gso9g1122 990 PANTHER PROTEIN NLP8 3 985 IPR045012 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1122 Gso-Chr9 32221347 32225994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1122 253 985 NLP Transcription Factor Family AT4G24020 51.617 0.0 655
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Gso9g1122 PB1 2.7e-20 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1122 - - gmx:100780901 1995.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1503 16 35265669 35270338 Gso9g1122 9 32221347 32225994 GST
Gso9g1122 9 32221347 32225994 Gso20g1286 20 42923530 42928731 PCT
Gso9g1122 9 32221347 32225994 Gso10g2091 10 47861047 47865877 PCT
Gso20g1286 20 42923530 42928731 Gso9g1122 9 32221347 32225994 PCT
Gso10g2091 10 47861047 47865877 Gso9g1122 9 32221347 32225994 PCT