Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1116 ATGACGCTAGTGAAAAAAACATGTTTATGTGGGATAGCAGAATCAATGCAAAGATATGTATTTGATGGAGAGGATGGAAAAATCGGTCTTGAACCAAAAAACCTAGTTTCTAGCACAAGTTTCTTGCTAGAACAGAAATTGCTGAAGGGATGGCTTGTTGACAAGGATGCGGAAGCACTAAGGTGCCAGAAGCAATTGGAGGAGGAGGAAGAAGCTGCTCAGAAAAGACAAGCTGAGATTTTGGAGAGGAAACGCCAGAAGAAGCTTAGACAAAAAGAGCAGAAAGCTAGGGAACAAAGACACAAAACTGAGGCAGAAATTAAAGGCAATATTGACAGTACTGTAAAGGCATTATTACTAGCAGAAGCATCTTTGGCTTTATCACTGGTAGAAGCATCTTTAGATACATACAATTTTGAAGCTCATAATCCAAATACATTTTCTGATAGCTCAGCTTCACCTGTACCTTCCCAATGTGCTGACACCAATGAAGTAATAAATGGATATATTCATTAG 516 0.3895 MTLVKKTCLCGIAESMQRYVFDGEDGKIGLEPKNLVSSTSFLLEQKLLKGWLVDKDAEALRCQKQLEEEEEAAQKRQAEILERKRQKKLRQKEQKAREQRHKTEAEIKGNIDSTVKALLLAEASLALSLVEASLDTYNFEAHNPNTFSDSSASPVPSQCADTNEVINGYIH* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1116 171 MobiDBLite consensus disorder prediction 83 104 - -
Gso9g1116 171 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 6 164 - -
Gso9g1116 171 Coils Coil 52 106 - -
Gso9g1116 171 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 6 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1116 Gso-Chr9 32137619 32140787 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1116 6 78 C2H2 Transcription Factor Family AT4G25610 64.384 2.67e-24 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1116 - - gmx:102669995 296.589
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1497 16 35198587 35207609 Gso9g1116 9 32137619 32140787 GST
Gso9g1116 9 32137619 32140787 Gso20g1292 20 42969564 42975163 PCT
Gso9g1116 9 32137619 32140787 Gso10g2085 10 47812595 47818112 PCT
Gso20g1292 20 42969564 42975163 Gso9g1116 9 32137619 32140787 PCT
Gso10g2085 10 47812595 47818112 Gso9g1116 9 32137619 32140787 PCT