Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1108 ATGCCTTCATGGTGGGGGAAATCATCGTCAACCAAGAAGAAAGCAAATAAGGAAAGTTTTATCAATGCATTTCACCGAAAATTTAAAATCCCATCCGAAGGTAAACCAAACAGTAGATCCGGAGGATCTCGTAGACATAGCAATGACTCAATTTCGGAGAAAGGGGCTCAGTCTCCTCCTGAATCAAGATCTCCTTCGCCTTCCAAAGTGGGAAGGTGTCAAAGCTTTGTTGATAGGCCTCATGCCCAGCCACTACCACTTCCTGGCCTGCACCCATCAAATATAAGCCGAGCAGATTCTGAAATTAGTATACCATCATCTAGAGCAAGACATGAAAAGGGCTCCAAACCATCATTGTTTCTTCCACTACCAAAACCGGTGTGCATCCGTGGTAGGTTGAACCCTGCTGATTTGGATGGAGATTTGGTCACTGCTTCAGTCTCTAGTGAGAGCTCTGCTGATAGTGATGAACCAGTGGACTCTCGCAATCGTAGTCCTTTGGCAACTGACTGTGAAACTGGGACTAGAACTGCTGCAGGCAGTCCCTCCAGCTTGATGGTCAAGGATCAATCAACTACTGTTTCCCAAATAAACTCAAGGGAAGCTAAAAAACCGGCAAACATTCTTGGTAATCATACGTCTTCTACTTCACCAAAACGTAGGCCCTTAAGCAACCATGTTACGAATCTGCAGATTCCTCCTCATGGTGCCTTCTGCAGTGCACCTGACAGTTCAAGATCAAGTCCATCAAGAAGTCCATTGAGATCATTTGGCACAGAACAGGTGTTGAACTCTGCTTTTTGGGCCGGAAAGCCATATCCAGAGGTCAATTTTGGTGGATCTGGCCACTGCTCAAGTCCTGGTTCTGGTCACAATTCTGGGCATAATTCAATGGGAGGGGACATGTCAGGGCAGTTATTTTGGCAACCTAGCAGGGGTAGCCCAGAGTATTCCCCCGTACCTAGTCCCAGAATGACTAGCCCAGGTCCAAGCTCTAGAATTCAGAGTGGAGCTGTTACACCTATTCATCCAAGAGCTGGGGGAACACCCAATGAATCACAAACAGGAAGGGTTGATGATGTAAAACCACAGAGTCATCGTTTACCCCTTCCTCCCTTAGCAGTTACCAATACTTTGCCTTTCTCTCATTCAAATTCTGCAGCAACTTCTCCATCTATGCCAAGAAGTCCTGGAAGAGCAGATAATCCAATTAGCCCTGGATCACGTTGGAAAAAAGGAAAGCTGCTTGGCAGAGGCACATTTGGACATGTCTATGTTGGCTTTAATAAGGAAAGTGGTGAAATGTGTGCTATGAAAGAGGTAACTCTGTTTTCAGATGATGCCAAATCTAAAGAAAGTGCTAAGCAATTAATGCAGGAAATTACCTTGTTGAGCCGGTTACGACATCCAAATATAGTGCAGTATTATGGTTCCGAAACAGTAGGCGACAAGCTTTACATATATCTGGAGTATGTTGCTGGAGGCTCCATATATAAACTTCTTCAAGAATATGGACAATTTGGTGAACTAGCTATTCGTAGTTTTACTCAACAAATTTTGTCAGGACTTGCTTATTTACATGCTAAAAATACTGTCCACAGGGACATCAAAGGAGCAAATATACTGGTAGATACTAATGGCCGGGTTAAGTTGGCAGACTTTGGCATGGCAAAGCATATAACAGGGCAATCATGTCCATTATCATTCAAGGGAAGCCCCTATTGGATGGCTCCTGAGGTTATAAAAAACTCTAATGGTTGCAACCTAGCTGTTGATATATGGAGCCTTGGATGCACAGTTTTGGAAATGGCTACAACTAAACCTCCTTGGAGTCAGTATGAAGGGGTTGCTGCCATGTTCAAGATTGGTAATAGCAAGGAACTCCCAACAATCCCAGATCATCTCTCTTGTGAAGGAAAGGATTTTGTTAGGAAATGCCTACAACGTAATCCACACAATCGCCCTTCAGCCAGTGAATTATTGGACCACCCTTTTGTAAAATATGCTGCACCTTTAGAAAGACCTATTCTGGGTCCTGAGTCTCCTTCAGACCCAGCAGTATCAGGGATCACACAAGGAGCTACAACTTCGGGCATTGGACAAGGAAGGAATCCATCTAAGTTGGATTCAGATCGACTTTCTCTTCATTCTTCTAGGTTTTTGAAAACTAATCCTCATGCAAGTGAAATCCATATTCCAAGGAATATATCTTGCCCTGTCTCACCCATTGGAAGCCCACTTTTGAGGCCAAGATCGCCACAACACATGAATGGGCGAATGTCTCCCTCCCCTATATCTAGCCCTCGGACTGCTTCTGGTGCATCCACACCTCTCAATGGTGGTAGTGGTGCCATTCCATTTAGTAATCACTTAGTTTACATTCAAGAGGGTCTTGGAAGCTTGCCAAAGTCTTCAAATGGTGTCTACGTTAGTGTCCCTGCTGCTCATCATGACTTGAATATTGACATTTTTCGAGGAATGCAACAGACATCTCACATTACATCAGAACTGGTTCCAAGTGAAAGTGATGTTTTGGGGAAGCAGTTTGCACGGTCTCCTCATAATGAGCCGTATGATGTTCAATCAGTCTTGGCTGACCGTGTTTGCCGGCAGCTGCTGGGGGATAATGTGAAAATTAACCCATCCCTTGATCTAAGTCCCAACTCTTTGCTCAGCCGGGCTAATGGTTTATGA 2694 0.4443 MPSWWGKSSSTKKKANKESFINAFHRKFKIPSEGKPNSRSGGSRRHSNDSISEKGAQSPPESRSPSPSKVGRCQSFVDRPHAQPLPLPGLHPSNISRADSEISIPSSRARHEKGSKPSLFLPLPKPVCIRGRLNPADLDGDLVTASVSSESSADSDEPVDSRNRSPLATDCETGTRTAAGSPSSLMVKDQSTTVSQINSREAKKPANILGNHTSSTSPKRRPLSNHVTNLQIPPHGAFCSAPDSSRSSPSRSPLRSFGTEQVLNSAFWAGKPYPEVNFGGSGHCSSPGSGHNSGHNSMGGDMSGQLFWQPSRGSPEYSPVPSPRMTSPGPSSRIQSGAVTPIHPRAGGTPNESQTGRVDDVKPQSHRLPLPPLAVTNTLPFSHSNSAATSPSMPRSPGRADNPISPGSRWKKGKLLGRGTFGHVYVGFNKESGEMCAMKEVTLFSDDAKSKESAKQLMQEITLLSRLRHPNIVQYYGSETVGDKLYIYLEYVAGGSIYKLLQEYGQFGELAIRSFTQQILSGLAYLHAKNTVHRDIKGANILVDTNGRVKLADFGMAKHITGQSCPLSFKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDHLSCEGKDFVRKCLQRNPHNRPSASELLDHPFVKYAAPLERPILGPESPSDPAVSGITQGATTSGIGQGRNPSKLDSDRLSLHSSRFLKTNPHASEIHIPRNISCPVSPIGSPLLRPRSPQHMNGRMSPSPISSPRTASGASTPLNGGSGAIPFSNHLVYIQEGLGSLPKSSNGVYVSVPAAHHDLNIDIFRGMQQTSHITSELVPSESDVLGKQFARSPHNEPYDVQSVLADRVCRQLLGDNVKINPSLDLSPNSLLSRANGL* 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1108 897 MobiDBLite consensus disorder prediction 144 256 - -
Gso9g1108 897 ProSitePatterns Protein kinases ATP-binding region signature. 416 439 IPR017441 GO:0005524
Gso9g1108 897 Gene3D Transferase(Phosphotransferase) domain 1 408 677 - -
Gso9g1108 897 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 813 - -
Gso9g1108 897 MobiDBLite consensus disorder prediction 166 231 - -
Gso9g1108 897 SUPERFAMILY Protein kinase-like (PK-like) 408 667 IPR011009 -
Gso9g1108 897 SMART serkin_6 410 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1108 897 CDD STKc_MEKK1_plant 409 666 - -
Gso9g1108 897 MobiDBLite consensus disorder prediction 1 125 - -
Gso9g1108 897 MobiDBLite consensus disorder prediction 52 71 - -
Gso9g1108 897 MobiDBLite consensus disorder prediction 282 312 - -
Gso9g1108 897 MobiDBLite consensus disorder prediction 741 781 - -
Gso9g1108 897 MobiDBLite consensus disorder prediction 280 412 - -
Gso9g1108 897 MobiDBLite consensus disorder prediction 11 51 - -
Gso9g1108 897 ProSiteProfiles Protein kinase domain profile. 410 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1108 897 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 1 813 - -
Gso9g1108 897 Pfam Protein kinase domain 411 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1108 897 MobiDBLite consensus disorder prediction 676 711 - -
Gso9g1108 897 MobiDBLite consensus disorder prediction 241 256 - -
Gso9g1108 897 MobiDBLite consensus disorder prediction 377 396 - -
Gso9g1108 897 MobiDBLite consensus disorder prediction 685 708 - -
Gso9g1108 897 MobiDBLite consensus disorder prediction 756 781 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1108 Gso-Chr9 31979501 31987316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1108 1 887 MAP Kinase Kinase Kinase AT1G63700 59.708 0.0 883
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gso9g1108 Pkinase 2.2e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1108 K20717 - gmx:100819762 1715.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1490 16 35124786 35132517 Gso9g1108 9 31979501 31987316 GST
Gso20g1297 20 42999282 43007265 Gso9g1108 9 31979501 31987316 PCT
Gso10g2081 10 47777580 47785511 Gso9g1108 9 31979501 31987316 PCT