Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1103 ATGGCAGGTGAGGTGGTGAAGAAGGAAGAGTCTCTCAACCTGAAAGTCACTAACAAGAGCCATGTTCAATCAGAGGAGAAAATTGGAAGAAAAGAGTACCAATTGGTCACTTTTGATCTTCCCTACTTGGCCTTTTACTACAACCAGAAGCTCTTGTTTTACAAGGGTGAAGATTTCGAGGGCATGGTCCAAAAACTCAAAGTTGGACTTGGAGTGGTGCTGAAGGAGTTCCACCAACTTGCTGGCAAGTTAGGGAAAGATGAAGAGGGGGTGTTCAGAGTGGAGTATGATGATGACATGCTTGGTGTGGAGGTTGTTGAAGCTGTTGTAGCTGATGATGAAATTGGTGTGGATGATCTAACTGTGGCTGAAATTAGTAACACTAATTTGAAGGAGCTGATACCTTATAGTGGTATCTTGAATTTGGAAGGCATGCATAGGCCCTTGCTGGCTGTTCAGTTAACGAAGCTCAAAGATGGGCTCGCAATGGGCCTAGCGTTCAACCATGCTGTCTTGGACGGGACTGCCACGTGGCAGTTCATGACCTCATGGGCCGAGATCTGCAGCGGTTCACCTTCCACGTCAGCACCACCCTTCCTGGACCGGACCAAGGCCCGGAACACACGCGTGAAGCTGGACCTTTCGCTACCAGAGCCCAACGGCCCACCAACTTCCAACGGTGAAGCAAAGCCCGCGCCAGCACTTAGGGAAAAAATCTTCAAATTCTCTGAGTCAGCCATCGACAAGATCAAGTCAACGGTCAACGAGAACCCTCCATCGGACGGCTCAAAACCATTCTCAACATTTCAGGCTCTTTCCTCCCACGTTTGGCGCCATGTAAGCCATGCACGTAACTTGAAGCCGGAGGATTATACCGTGTTCACCGTCTTTGCCGATTGCCGGAAGCGGGTGGACCCGCCAATGCCGGAGACTTATTTCGGAAACCTAATTCAGGCTATTTTTACCGTTACAGCGGTTGGGCTCTTAACGGCCCATCCGCCACAATTCGGGGCTTCATTGGTGCAGAAAGCCATTGAAGCCCACAATGCTAAGACTATTGAGGAACGTAACAAAGAGTGGGAAAGTGCACCCAAAATTTTTGAATTCAAAGATGCTGGGGTGAATTGTGTGGCTGTGGGAAGTTCCCCAAGGTTTAAAGTTTATGACATTGATTTTGGATGGGGGAAGCCAGAGAATGTGAGGAGTGGGACTAATAACAAGTTTGATGGGATGATTTATTTGTATCCGGGGAAAAGTGGAGGAAGGAGCATTGATGTGGAACTAACCTTGGAGCCTGAGGCTATGGGGAAGTTGGAGCAAGACAAGGATTTTCTTTTGGAAGCATAA 1347 0.4833 MAGEVVKKEESLNLKVTNKSHVQSEEKIGRKEYQLVTFDLPYLAFYYNQKLLFYKGEDFEGMVQKLKVGLGVVLKEFHQLAGKLGKDEEGVFRVEYDDDMLGVEVVEAVVADDEIGVDDLTVAEISNTNLKELIPYSGILNLEGMHRPLLAVQLTKLKDGLAMGLAFNHAVLDGTATWQFMTSWAEICSGSPSTSAPPFLDRTKARNTRVKLDLSLPEPNGPPTSNGEAKPAPALREKIFKFSESAIDKIKSTVNENPPSDGSKPFSTFQALSSHVWRHVSHARNLKPEDYTVFTVFADCRKRVDPPMPETYFGNLIQAIFTVTAVGLLTAHPPQFGASLVQKAIEAHNAKTIEERNKEWESAPKIFEFKDAGVNCVAVGSSPRFKVYDIDFGWGKPENVRSGTNNKFDGMIYLYPGKSGGRSIDVELTLEPEAMGKLEQDKDFLLEA* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1103 448 Gene3D - 218 441 IPR023213 -
Gso9g1103 448 Gene3D - 14 215 IPR023213 -
Gso9g1103 448 PANTHER BAHD ACYLTRANSFERASE DCR-RELATED 21 444 - -
Gso9g1103 448 MobiDBLite consensus disorder prediction 213 232 - -
Gso9g1103 448 Pfam Transferase family 14 444 - -
Gso9g1103 448 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 21 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1103 Gso-Chr9 31830628 31834359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1103 64 447 Monolignol Biosynthesis Gene Families AT5G48930 27.654 5.15e-37 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1103 K19747 - gmx:100818158 879.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1485 16 35035715 35039590 Gso9g1103 9 31830628 31834359 GST