Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1098 ATGTCATCGCCGGGGTTCCCTGGCGGCGGTAGTGCGTCTGAGTTTTTCGCTGGAGCGGGTGTTTTCGGCGGCAGATCCATTCCGGGGGCCACCATGAACAACCCCAACGCCGCCGCTTCCGCCACCATCAACAACCTCCACCCTCTCTACCGAACCCAACAACAACAGAACCTTCCCGCAATGTTTCTAGATCCTTCCTCGCAGATCGCCCAACGCCAAACACCAACCTTCATCGGTAAGCGCACCCTAACCGAATTCCAAGCCTACAACCAAACCAACAACAACCCCAACCACGTCCTCTCGAACCTCCTGCTTCGTTCCGTTAAGCCCCGGACCAGTTTATACCACACCTCTATGGACTTTCCTGTTCCCGAATTGCAAAACCAAAACCTTTATTCCAACCAAACGCAGCGTTTTGGTGTTCCGTTACTTCACCAGCTTCGTCCTCAGCCCATTAATCTCCCCAACAACGGGCCCGTGCCCATGACAGGCCCAAATTTCGGTTACCGGAACTCGAATTTGGGCTTACCACAGAACCAGAACCGGGTTCGTGTTTCTCTCCCTGTTTCTGTTCCGGTTCAGGTTCACTCATCTGAACCGGAAAAGAAGATCATGGACCACAGGCTTCTGGAATTGGAGAAGCAGCTTCTGGAAGATAACGACGACGAAGGAGAAGCTGATGCTGCGTCTGTGATAACCACGAGCGAGTGGTCCGAGACTTATCAGAATTTAATCAGTCCCAGTCCGGTTCAGAAACCGGTTTTGACGACGACGTCGCCGACTTCTTCCACGACGTCGTCCACGTCATCTTCTTCCTCCGTGGCTTCGCCTGCTTCCGGATGCTCCAAGCAAACGCTCATGGAAGCCGCATCTGCAATTGTTGAAGGTAAACACGATGTTGCGGCGGAGATCCTGAACCGGTTGAACGGTGTGAACCGGAGTGATAGGTTGACGGATTGCATGGTTTCGGCGTTGAAATCGAGGATGAATCCGGTGGAGTATCCTCCGCCGGTGGCGGAGCTTTTCAGGAAGGAGCACGCCGATTCGACTCAGATGCTCTTGGAGAACTCGGTGTGCTTCACGGTAGGGTTCATGGCGGCGAATCTCGCGATTCTGGAAGCCGCATTTGAGGAGAAAACGGAGACGAGCAGGTTCTGCGTGGTGGATTTTGAGATTGGACAAGGGAAGCAGTATTTGCACCTCCTCAACGCGCTCTCGGCGCGTGGACAGAACGTGGCGGTGAAGATCGCAGCCGTAGCAGAAAAAGGAGGTGAGGAGAGAGTGCGGGCTGTGGGAGACATGCTGAGATTACTCGCGGAGAGGCTGAGGATCCGGTTCGAGTTCAAAATCGTCGCGACTCAGAAAATCGTCGAGTTGACTCGTGAGTCGCTGGGATGCGATGCGGACGATGTTCTCATGGTGAACTTCGCGTTCAAGCTGAACAAGATTCCGGACGAGAGCGTCTCCCCGGAAAACCCTCGGGACGAGCTTCTTCGGCGCGTGAAGAGACTCGCGCCGCGCGTGGTGACGGTTGTGGAGCAGGAGATAAACGGGAACACGGCGCCGTTTTTGGCGCGCGTGGCGGAAACGCTGTCGTATTACGGCGCGTTGTTGGAGTCCATTGAGGCCACCACGGTGGGGAAAGATAACAGCATTAACAACTCAGACCGAGTCAGACTCGAGGAGGGACTGAGTCGAAAATTGCATAACTCGGTGGCGTGCGAAGGAAGAGATCGCGTGGAACGGTGCGAAGTGTTTGGAAAATGGCGCGCGCGTATGAGCATGGCGGGGTTTGAGTTAAAACCACTGAGTCAAAGCATGGTCGAGTCAATTAAAGCGCGACTCATCTCTGCCAACAACCGAGTCAACTCGGGACTCACCGTAAAAGAAGAGAACGGAGGGATTTGCTTTGGTTGGATGGGAAGAACACTCACAGTCGCATCTGCTTGGCGTTAA 1956 0.5445 MSSPGFPGGGSASEFFAGAGVFGGRSIPGATMNNPNAAASATINNLHPLYRTQQQQNLPAMFLDPSSQIAQRQTPTFIGKRTLTEFQAYNQTNNNPNHVLSNLLLRSVKPRTSLYHTSMDFPVPELQNQNLYSNQTQRFGVPLLHQLRPQPINLPNNGPVPMTGPNFGYRNSNLGLPQNQNRVRVSLPVSVPVQVHSSEPEKKIMDHRLLELEKQLLEDNDDEGEADAASVITTSEWSETYQNLISPSPVQKPVLTTTSPTSSTTSSTSSSSSVASPASGCSKQTLMEAASAIVEGKHDVAAEILNRLNGVNRSDRLTDCMVSALKSRMNPVEYPPPVAELFRKEHADSTQMLLENSVCFTVGFMAANLAILEAAFEEKTETSRFCVVDFEIGQGKQYLHLLNALSARGQNVAVKIAAVAEKGGEERVRAVGDMLRLLAERLRIRFEFKIVATQKIVELTRESLGCDADDVLMVNFAFKLNKIPDESVSPENPRDELLRRVKRLAPRVVTVVEQEINGNTAPFLARVAETLSYYGALLESIEATTVGKDNSINNSDRVRLEEGLSRKLHNSVACEGRDRVERCEVFGKWRARMSMAGFELKPLSQSMVESIKARLISANNRVNSGLTVKEENGGICFGWMGRTLTVASAWR* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1098 651 PANTHER SCARECROW-LIKE PROTEIN 8 72 650 IPR030013 -
Gso9g1098 651 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 72 650 IPR005202 -
Gso9g1098 651 Pfam GRAS domain family 283 651 IPR005202 -
Gso9g1098 651 ProSiteProfiles GRAS family profile. 273 651 IPR005202 -
Gso9g1098 651 MobiDBLite consensus disorder prediction 244 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1098 Gso-Chr9 31479514 31481954 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1098 44 651 GRAS Transcription Factor Family AT5G52510 47.014 1.04e-153 456
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso9g1098 GRAS 5.1e-84 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1098 - - gmx:100808172 1206.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1480 16 34967992 34970388 Gso9g1098 9 31479514 31481954 GST
Gso9g1098 9 31479514 31481954 Gso20g1302 20 43045622 43047811 PCT
Gso9g1098 9 31479514 31481954 Gso10g2074 10 47710312 47712441 PCT
Gso20g1302 20 43045622 43047811 Gso9g1098 9 31479514 31481954 PCT
Gso10g2074 10 47710312 47712441 Gso9g1098 9 31479514 31481954 PCT