Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1097 ATGATTTCTTTCGTGTCCTTTTCGGCGTCTCTTCCTGCCATTAAATTCTCTGGCAATGCCATGGCTTCATCGTCGTGCCGCGTCAAATCCCGGCCAATAGTCGCCTTCGCCACCGCTGAAGCTCGCTCTTCCTGGACGGAGCAACTGAGACCTTCGTATCTGAACTCCTCTTACTTTTCGCTTTACGATATCCTCGGCATCCCTTCCGACGCCTCTAACCAAGAAATCAAGGCCGCGTACCAGCGACTGGCCAGAGTCTACCACCCCGACATGGCGGCCATCGACCGAAAAAACTCGTCTGCTGACGAATTCATGAAGATCCACGCCGCGTACTCTACTCTTTCCGATCCCGACAAGCGCGCTAACTATGATCGGAGCCTATTCTGGCGACAATGGTTGTAG 402 0.5348 MISFVSFSASLPAIKFSGNAMASSSCRVKSRPIVAFATAEARSSWTEQLRPSYLNSSYFSLYDILGIPSDASNQEIKAAYQRLARVYHPDMAAIDRKNSSADEFMKIHAAYSTLSDPDKRANYDRSLFWRQWL* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1097 133 CDD DnaJ 62 116 IPR001623 -
Gso9g1097 133 Gene3D DnaJ domain 51 131 IPR036869 -
Gso9g1097 133 SMART dnaj_3 59 119 IPR001623 -
Gso9g1097 133 SUPERFAMILY Chaperone J-domain 56 128 IPR036869 -
Gso9g1097 133 PRINTS DnaJ domain signature 62 80 IPR001623 -
Gso9g1097 133 PRINTS DnaJ domain signature 80 95 IPR001623 -
Gso9g1097 133 PRINTS DnaJ domain signature 99 119 IPR001623 -
Gso9g1097 133 ProSitePatterns Nt-dnaJ domain signature. 104 123 IPR018253 -
Gso9g1097 133 PANTHER - 1 131 - -
Gso9g1097 133 Pfam DnaJ domain 61 124 IPR001623 -
Gso9g1097 133 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 1 131 - -
Gso9g1097 133 ProSiteProfiles dnaJ domain profile. 60 127 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1097 Gso-Chr9 31425852 31427704 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1097 62 124 C2H2 Transcription Factor Family AT1G74250 40.299 3.57e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1097 - - gmx:100807111 266.544