Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1095 ATGGATCCCAATGATGATAGGGGTGAAAGTAGACTCTATATTGGTAACCTTGATCTTAGAATTACAGAAGCTGCTTTGCTTAAAATGTTTTCTCCCTATGGAAAGATAATTTCTGAGGACTTCTTATGGCACACGCGTGGCCCAAAACGTGGGGAGCCACGTGGTTTTGCTTTTATCCAGTATAGCACAAAAGAGGAAGCAGAATTAGCCAAGGAGAAAATGCATGGGAGGTTAGCTTGCAGCCGGCCATTGGTGGTTCGTCTTGCCGGTGATAAGTGCATGTTGGAAACAGTTGATAGCTCTACAAAAGCAGCTGGTGAAGGGCACAAGATGCATCTCACTGGTGGTGGTGGTGCCATGGGACAAACAAGTCGCAGTGCAAAAATTGCCGCTATAAAAAACAAATTGAAATCCTTAGAGGAGGAGAGTTCTAGGACCAAGAAGCAGAAGCAAAGTGATAATATTTCTTGA 471 0.4395 MDPNDDRGESRLYIGNLDLRITEAALLKMFSPYGKIISEDFLWHTRGPKRGEPRGFAFIQYSTKEEAELAKEKMHGRLACSRPLVVRLAGDKCMLETVDSSTKAAGEGHKMHLTGGGGAMGQTSRSAKIAAIKNKLKSLEEESSRTKKQKQSDNIS* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1095 156 PANTHER RNA-BINDING PROTEIN 18-RELATED 5 153 - -
Gso9g1095 156 SUPERFAMILY RNA-binding domain, RBD 3 92 IPR035979 GO:0003676
Gso9g1095 156 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 5 153 - -
Gso9g1095 156 MobiDBLite consensus disorder prediction 101 156 - -
Gso9g1095 156 MobiDBLite consensus disorder prediction 134 149 - -
Gso9g1095 156 SMART rrm1_1 11 87 IPR000504 GO:0003723
Gso9g1095 156 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 12 83 IPR000504 GO:0003723
Gso9g1095 156 Gene3D - 8 97 IPR012677 -
Gso9g1095 156 CDD RRM_RBM18 11 89 IPR039157 -
Gso9g1095 156 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 10 91 IPR000504 GO:0003723
Gso9g1095 156 Coils Coil 129 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1095 Gso-Chr9 31408998 31411423 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1095 10 92 Eukaryotic Initiation Factors Gene Family AT1G71770 39.759 3.62e-11 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1095 K24527 - gmx:100806572 313.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1478 16 34946744 34950005 Gso9g1095 9 31408998 31411423 GST