Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1094 ATGGAGACTCAAAAGCTAATTACGCATTTCATTCTTCTTTTTCTTCTTCCTCTTCTTTTCATTTCTTGTTCATCCGCTTTCACTACCATAGATAACTACCTTATCAGCTGTGGATCACAGAACAATGCCTCTATCTTCAATCGCATCTTCATCAGTGATTCTACCAGCCAAGGTTCAATTTTCCTCTCTGCTGACAAATCCATTTCCCTCACCAACCAAAACCCCCCTCCAAATTTGCCTACTTTGTACCACACTGCAAGAGTTTTCCCCAGCACTGGGAGCTACAGGTTCAACATGAGGATGAATGGTTCCCACTTTGTTCGTTTTCATTTCTCACCTTTTAAGGCTCAAAGGTTTGATCTAAAATCTGCTAACTTTAGTGTCTTGGTTGATGGCAATTTGGTGCTGAGAAATTTCAAGCCAAGTAATGGTGCACTGCTTAAAGAGTTTATTTTGAAGATAGAGTCAAATTTGCTTGAAATTGTGTTTAGACCTGAAGGTAATTCAGGTTTTGGCTTTGTGAATGCTGTGGAGGTGTTCACTGCTCCTGCTGATTTTGTTGTAGATTATGGAGCTAGGTTGGTTGGTCCTTCTGGTGTGGTAGAGTACAAGAACCTTTCATCTCAGGTTTTGGAAACTGTCCATAGGATTAATGTTGGGGGTGTGAAAGTAACTCCTTTTAATGACACCCTTTGGAGGACTTGGATTCCTGATGAGGAATTTCTGGTTTTCAAGGATGCTGCTAAGCGTGTGGGGATCACTCACACACCAAATTACCAGAAGGGAGGCGCAACTCGAGAGATCGCGCCTGATAATGTTTACATGACTGCTCAGGAAATGAATAAGGATCACTCCATTATAGCTTCACAGTTCAACATAACCTGGAATTTTCCTGTGGCTCCAGGTGGTGTTCGGCACTTGGTTCGGCTGCATTTCTGTGATATTGTTAGTGTTGCTCTTAATTTTCTCTACTTTGATGTGTATATCAATGGGTATTCTGCTTACAAGGATCTTGATTTGTCATCCCTTACATTTCATGTGCTTGCGTCTCCTATCTATGTGGATTTTGTTGTAGATTCTGATGAATCGGGTGTTATTCAAATAAGTGTTGGCCCTTCTGAACTTAGCAGTTCTACGAGGATGAATGCCATTTTGAATGGTGCAGAGATAATGAAGCTGGTGAATGTTCCGGGCTCACATGTTGTTCCTAGGAAGAAGAGGTTGTGGGTGTTGGTGGGTTCAATTGTTGGAGGAATTGTTGTTTTGCTTTTGGTTATAGTTGCTTTGCTGCTTTCTCTCAAATGCAGGAAGAAGAAGAAGAAGAAGAAACCAAGACAAAGAACAATGGAAAGTGTAGGGTGGACGCCTTTACGGATGTTTGGAGGGAGTTCACTTAGTAGAATGTCTGAAGGGACAGCTTTTCCCTCTCCTGGTTCTTATGGTTATTTTGGCTTGAGAATCTCTTTTGCTGATATACAATCAGCAACAAACAATTTTGATAGAAGTCTAATTATAGGGTCTGGTGGGTTTGGTATGGTTTACAAAGGGGTGCTCAAAGACAATGTGAAGGTTGCAGTCAAAAGAGGCATGCCTGGATCCAGACAAGGCCTTCCAGAATTCCAGACTGAAATAACAATCTTATCCAAAATTCGCCATCGCCATCTTGTTTCACTAGTTGGATATTGTGAAGAAAATTCAGAAATGATACTTGTTTACGAGTATGTGGAAAAAGGTCCACTCAAAAAGCATCTATATGGCTCAGCAGGACATGCACCTTTGTCTTGGAAGCAGCGGCTTGAGATATGCATTGGTGCAGCTAGAGGTCTCCACTACCTACACACTGGTTTCGCACAAGGAATCATCCACCGTGACATCAAATCAACCAATATTTTGCTTGATGAAAACTATGTGGCCAAGGTTGCTGATTTTGGTCTTTCAAGATCTGGACCTTGTCTCAATGAAACCCATGTGAGTACTGGTGTGAAAGGAAGTTTCGGTTATCTTGATCCGGAGTATTTCCGAAGGCAGCAGCTTACAGATAAGTCAGATGTCTACTCATTTGGCGTGGTGCTTTTTGAGGTTCTTTGCGCCAGACCTGCTGTTGATCCACAACTTGATAGGGAACAGGTGAACTTAGCCGAATGGGCACTTGAATGGCAGAAAAAGGGCATGCTGGAGCATATCATTGATCCCTATCTTGTTGGGAAGATAAAGCAAAGCTCATTGAAGAAATTTAGTGAAACAGCAGAGAAATGTTTAGCTGAATATGGTGTTGATAGGCCAACAATGGGTTCTGTATTGTGGAATTTGGAATATGCACTTCAACTCCTAGAAAGTGAACAAGAAGGGGAGCCATATGATGATAGCAGTGCTCAGGAAGCAGTGAATGTGACAACTACAACAATTCCTGGAAGTCCTTCGAGTAATGTAAGAAGAGAGGGAGATAATGATAATGCTTATTCAGACATAAGTGCTACTGAAGTTTTTTCTCAACTAATGAACAGGGAAGGCAGATAG 2517 0.4172 METQKLITHFILLFLLPLLFISCSSAFTTIDNYLISCGSQNNASIFNRIFISDSTSQGSIFLSADKSISLTNQNPPPNLPTLYHTARVFPSTGSYRFNMRMNGSHFVRFHFSPFKAQRFDLKSANFSVLVDGNLVLRNFKPSNGALLKEFILKIESNLLEIVFRPEGNSGFGFVNAVEVFTAPADFVVDYGARLVGPSGVVEYKNLSSQVLETVHRINVGGVKVTPFNDTLWRTWIPDEEFLVFKDAAKRVGITHTPNYQKGGATREIAPDNVYMTAQEMNKDHSIIASQFNITWNFPVAPGGVRHLVRLHFCDIVSVALNFLYFDVYINGYSAYKDLDLSSLTFHVLASPIYVDFVVDSDESGVIQISVGPSELSSSTRMNAILNGAEIMKLVNVPGSHVVPRKKRLWVLVGSIVGGIVVLLLVIVALLLSLKCRKKKKKKKPRQRTMESVGWTPLRMFGGSSLSRMSEGTAFPSPGSYGYFGLRISFADIQSATNNFDRSLIIGSGGFGMVYKGVLKDNVKVAVKRGMPGSRQGLPEFQTEITILSKIRHRHLVSLVGYCEENSEMILVYEYVEKGPLKKHLYGSAGHAPLSWKQRLEICIGAARGLHYLHTGFAQGIIHRDIKSTNILLDENYVAKVADFGLSRSGPCLNETHVSTGVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPAVDPQLDREQVNLAEWALEWQKKGMLEHIIDPYLVGKIKQSSLKKFSETAEKCLAEYGVDRPTMGSVLWNLEYALQLLESEQEGEPYDDSSAQEAVNVTTTTIPGSPSSNVRREGDNDNAYSDISATEVFSQLMNREGR* 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1094 838 SMART serkin_6 499 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1094 838 ProSitePatterns Protein kinases ATP-binding region signature. 505 527 IPR017441 GO:0005524
Gso9g1094 838 SUPERFAMILY Protein kinase-like (PK-like) 482 769 IPR011009 -
Gso9g1094 838 ProSiteProfiles Protein kinase domain profile. 499 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1094 838 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Gso9g1094 838 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 20 804 - -
Gso9g1094 838 MobiDBLite consensus disorder prediction 798 822 - -
Gso9g1094 838 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Gso9g1094 838 Gene3D Transferase(Phosphotransferase) domain 1 575 796 - -
Gso9g1094 838 Pfam Protein tyrosine and serine/threonine kinase 504 766 IPR001245 GO:0004672|GO:0006468
Gso9g1094 838 Gene3D Phosphorylase Kinase; domain 1 478 574 - -
Gso9g1094 838 Gene3D - 210 394 - -
Gso9g1094 838 Gene3D - 32 184 - -
Gso9g1094 838 CDD STKc_IRAK 505 771 - -
Gso9g1094 838 PANTHER OS07G0166700 PROTEIN 20 804 IPR045272 GO:0004714|GO:0006468
Gso9g1094 838 Pfam Malectin-like domain 35 392 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1094 Gso-Chr9 31403475 31406348 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1094 10 838 Receptor kinase-like Gene Family AT3G46290 49.176 0.0 759
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gso9g1094 Malectin_like 3.7e-34 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1094 - - gmx:100814974 1566.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1477 16 34940735 34943892 Gso9g1094 9 31403475 31406348 GST
Gso9g1094 9 31403475 31406348 Gso20g1304 20 43068801 43072008 PCT
Gso9g1094 9 31403475 31406348 Gso10g2070 10 47666810 47670067 PCT
Gso20g1304 20 43068801 43072008 Gso9g1094 9 31403475 31406348 PCT
Gso10g2070 10 47666810 47670067 Gso9g1094 9 31403475 31406348 PCT