Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1090 ATGGCGGCAGGACTCTCCGCCGCCATAACCATGAAACCCCTCCTCCGTTTCCACCAACCTCGCCTCCCCAAACCAATCCCAACAACACTCCCTTTCTCTCCCTTGAGAATTTTCCATCACACAGCATCACCGATACCCCAAAATTTTTCAACTTTCACCGTTTGTGTCCTCATGCAGGACCCAAAACAAGGCACCCAGATGGAAATTCAGGCACAAGAACCACCACCCTCTCCTCCTCAGCAAGTTTTGTCACAAAAGTTGGCTGAGAAATTGGCCAGAAAAGAGTCTGAGAGCTTCACTTACCTCATTGCTGCTGTCATGTCTAGCTTCGGCATCACATCCATGGCAGTGTTCGCTGTTTATTATAGATTTGCATGGCAAATGGAGGGTGGAGAAGTGCCTTTGTCTGAAATTTTTGGCACATTTGCTCTATCAGTGGGAGCTGCTGTGGGTATGGAGTTTTGGGCTAGATGGGCTCACAGGGCTCTATGGCATGCTTCCCTGTGGCACATGCATGAGTCCCATCATCGACCAAGAGAAGGGCCCTTCGAGCTTAACGATGTATTTGCAATAATCAACGCTGTCCCTGCCATCGCTCTCCTTTCCTATGGTTTCTTTAACAAGGGACTGGTCCCTGGGCTTTGTTTTGGTGCGGGTCTTGGAATTACTGTCTTTGGGATGGCCTACATGTTTGTACACGATGGATTGGTTCACAAGAGATTCCCGGTGGGCCCCATAGCCAACGTGCCCTATCTCAGAAGGGTGGCCTCTGCTCACCAACTTCACCATTCGGAAAAATTCGATGGAGTGCCTTATGGGCTGTTTATGGGACCAAAGGAAGTTGAAGAGGTGGGGGGGCTAGAAGAGCTGGAGAAAGAGATAAGTAGGAGAGCAAGATCATACAAAATAGCTAGAGAGAAAAGCTAA 927 0.4908 MAAGLSAAITMKPLLRFHQPRLPKPIPTTLPFSPLRIFHHTASPIPQNFSTFTVCVLMQDPKQGTQMEIQAQEPPPSPPQQVLSQKLAEKLARKESESFTYLIAAVMSSFGITSMAVFAVYYRFAWQMEGGEVPLSEIFGTFALSVGAAVGMEFWARWAHRALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSYGFFNKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIANVPYLRRVASAHQLHHSEKFDGVPYGLFMGPKEVEEVGGLEELEKEISRRARSYKIAREKS* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1090 308 PANTHER BETA-CAROTENE HYDROXYLASE 2 301 - -
Gso9g1090 308 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 2 301 IPR045019 GO:0016491
Gso9g1090 308 Pfam Fatty acid hydroxylase 148 275 IPR006694 GO:0005506|GO:0008610|GO:0016491
Gso9g1090 308 Coils Coil 287 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1090 Gso-Chr9 31266305 31268964 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1090 1 218 Chloroplast and Mitochondria Gene Families AT4G25700 61.572 2.67e-92 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1090 K15746 - gmx:100813368 602.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1472 16 34900017 34902708 Gso9g1090 9 31266305 31268964 GST
Gso9g1090 9 31266305 31268964 Gso20g1307 20 43087999 43090700 PCT
Gso9g1090 9 31266305 31268964 Gso10g2067 10 47649139 47651411 PCT
Gso20g1307 20 43087999 43090700 Gso9g1090 9 31266305 31268964 PCT
Gso10g2067 10 47649139 47651411 Gso9g1090 9 31266305 31268964 PCT