Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso9g1060 | ATGACTCATGAGGATTGGGATCTCTTTGCCATCGTTAGAAGTTGCAAAGCTGCTACATTTACTGCCACCACAAACACAGAAACCCCACCCACCACTACCACCACCACCACCCCCAACACTACCTCTTGCTCGGGTTTGAGCCAAGAAAATGGCTCATTCTCTTTTCCCAATCTGGTGCAACCAACAACCAATGGGTTCCAAGAGCTTCAACACCAACAATTGTTAATAAACTTCAACCCCACCAACACCATTACTAGCACTAGCACTAGCACTAGCACTAGTGGCCTTGGCATCAATCCCAATTCCACGTTTTCTGAAGTTGCGGGATTCATTGGACAACAGCAGATACAGCAAAGTCTCCACCACCATCTCGTTCCTGCTCCCACAAATCACACCTTCATTGGAACACCCTCCACTACTGGTTTTGACAGGTTCCAACAACAGCAACTCCAAACCCCAGAACAACAGCAACCACAGCAAAACCAACCACCCCTTCAAGCACCACAAACAAGTCACATCCTTTCACCAACCACACAACCACAAACACCCAGATCAAGAAAAAGAAAGAGCCAGCAGAAGAAAATGGTATGCCATGTAACCGCACAAAACCTCTCATCAGACTTGTGGGCATGGCGAAAATATGGACAAAAACCCATCAAAGGCTCTCCATATCCAAGGAACTATTACAGATGCAGTAGCTGCAAAGGATGCGCTGCGAGAAAGCAAGTAGAGCGAAGCACCAGCGAACCCAACACGTTCATCGTGACCTACACCGGCGACCACAAACACGCGAAACCCGTTCACCGGAACTCCCTCGCCGGCAACACCAGAACAAAACTATCCACCACCCGTTTACCCGAAACCCATGAAACCGTGTCTTGTGTAATAATAGAAAACGCATGCTCTTCAAACTCTGAGCTTTCTCCCATGTCGGTAAGGTCCGACACGCTGGAAAACGAGGCAACGCTCGTACCCGGCGAACCCGATTGCCCGGACACGGATATTGACCCTGAGGTGCCCTCTGAAGAAGACGAAGACGTTTTGATACCCAACACAGGTGCCATGTCAGACTCGATTTTCTTGGGGTTGACCAATTTTGACCGCGACGGCGTTTCCACGCTTTAA | 1125 | 0.4916 | MTHEDWDLFAIVRSCKAATFTATTNTETPPTTTTTTTPNTTSCSGLSQENGSFSFPNLVQPTTNGFQELQHQQLLINFNPTNTITSTSTSTSTSGLGINPNSTFSEVAGFIGQQQIQQSLHHHLVPAPTNHTFIGTPSTTGFDRFQQQQLQTPEQQQPQQNQPPLQAPQTSHILSPTTQPQTPRSRKRKSQQKKMVCHVTAQNLSSDLWAWRKYGQKPIKGSPYPRNYYRCSSCKGCAARKQVERSTSEPNTFIVTYTGDHKHAKPVHRNSLAGNTRTKLSTTRLPETHETVSCVIIENACSSNSELSPMSVRSDTLENEATLVPGEPDCPDTDIDPEVPSEEDEDVLIPNTGAMSDSIFLGLTNFDRDGVSTL* | 375 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso9g1060 | 374 | Gene3D | WRKY domain | 188 | 259 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Gso9g1060 | 374 | SUPERFAMILY | WRKY DNA-binding domain | 199 | 266 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Gso9g1060 | 374 | MobiDBLite | consensus disorder prediction | 322 | 341 | - | - | |
Gso9g1060 | 374 | ProSiteProfiles | WRKY domain profile. | 200 | 266 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gso9g1060 | 374 | Pfam | WRKY DNA -binding domain | 207 | 263 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gso9g1060 | 374 | PANTHER | WRKY TRANSCRIPTION FACTOR 27-RELATED | 4 | 366 | - | - | |
Gso9g1060 | 374 | MobiDBLite | consensus disorder prediction | 23 | 48 | - | - | |
Gso9g1060 | 374 | MobiDBLite | consensus disorder prediction | 127 | 185 | - | - | |
Gso9g1060 | 374 | MobiDBLite | consensus disorder prediction | 127 | 196 | - | - | |
Gso9g1060 | 374 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 4 | 366 | IPR044810 | GO:0003700 | |
Gso9g1060 | 374 | SMART | WRKY_cls | 205 | 265 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso9g1060 | Gso-Chr9 | 30694597 | 30696523 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso9g1060 | 184 | 279 | WRKY Transcription Factor Family | AT5G52830 | 80.208 | 3.62e-52 | 175 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Gso9g1060 | WRKY | 6.1e-24 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso9g1060 | - | K13425 | gsj:114367469 | 644.81 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso16g1452 | 16 | 34768087 | 34769942 | Gso9g1060 | 9 | 30694597 | 30696523 | GST | |
Gso9g1060 | 9 | 30694597 | 30696523 | Gso20g1312 | 20 | 43136402 | 43138536 | PCT | |
Gso9g1060 | 9 | 30694597 | 30696523 | Gso10g2057 | 10 | 47580193 | 47582123 | PCT | |
Gso20g1312 | 20 | 43136402 | 43138536 | Gso9g1060 | 9 | 30694597 | 30696523 | PCT | |
Gso10g2057 | 10 | 47580193 | 47582123 | Gso9g1060 | 9 | 30694597 | 30696523 | PCT |