Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1033 ATGCAGTTGGCGAAGAAGCGAGCCGACAACCTCGCTCTGATCGACGAGTCCGGAGCGGTGGCGGCTCTGATTCCGCTGCTCTGGTGCAGCGATTCGTGGACGCAGGAACACGCGGTGACGGCGTTGCTGAACCTGTCTCTTTTGGAAGAGAACAAGGCGCTTATAACGAATGCGGGTGCGGTGAAGTCGCTAATATACGTGCTGAAAAGAGGGACGAAGACTTCGAAGCAGAACGCGGTGAGGAATGACAAAAGCATAAGAGAGACCACAAAAGAGGGCTTCATTTTGAAAGAAAAATCTTGGGAAGAAATGAGCAGGTTAATCCTTAAACAAAGAGGGTAG 342 0.5117 MQLAKKRADNLALIDESGAVAALIPLLWCSDSWTQEHAVTALLNLSLLEENKALITNAGAVKSLIYVLKRGTKTSKQNAVRNDKSIRETTKEGFILKEKSWEEMSRLILKQRG* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1033 113 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 18 60 IPR000225 GO:0005515
Gso9g1033 113 PANTHER U BOX DOMAIN-CONTAINING 3 79 - -
Gso9g1033 113 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 3 79 - -
Gso9g1033 113 Gene3D - 1 85 IPR011989 -
Gso9g1033 113 SUPERFAMILY ARM repeat 3 79 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1033 Gso-Chr9 29505988 29506834 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1033 3 79 U-box Gene Family AT3G46510 50.649 2.34e-19 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1033 - - gsj:114425906 220.32