Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1011 ATGCAAATGTCTCAGAAACATAAAATGTCCTATGACTCTAGCAGGTTCAGCATTGAGCCTGTGCAAAATCTGGGGTCATGTTGCTTCCTGCAAAGTGGGAACCTAGACTACTCCTCATCCTCTGATAACGGTAGCCATACAACCTACCCTTCTGTTTGTATTTTCGAACAATATTGCACCCTGGAATCTTCTACAAACAACAATATCCCTTCCCTAAACTCTCCATCTACTGTCAGTTTCTCACCTAACAATAGCCCAGTCTCAAAGCTGCATTCAAAAGCATATGTGTTGAGTTCACAAAATTTGCTTGAAATTGTTAATGAATCGCTAGAAAACAAATCTTTCTTGACACTTAACGATGATGAGCTGAGGCACAAGATAAGAGAGCTTGAAAGTGCTATGTTGGGACATGATACAGATATTCTGGATACCTATGATACCATAATTCCAAAAGAATCTGATTCGTTTTTGAAAGAGGCAGAAAGGTGGAAGAGGATGATGGCAATGATATCTAGAGGGGATTTAAAAGAGATGCTTTGTACATGTGCAAAAGCAGTGGCAGGAAATGATATGGAGACAACTGAATGGTTGATGTCAGAGTTGCGTAAAATGGTCTCTGTCTCCGGCAATCCAATCCAACGATTGGGAGCATACATGTTGGAGGCTCTTGTTGCAAGGCTTGCCTCTTCAGGAAGCACAATCTTCAAAGTCTTGAAATGTAAAGAGCCTACTAGTAGTGAACTCCTTTCACAGATGCATCTACTTTATGAAATCTGTCCATATCTCAAATTTGGTTACATGTCAGCAAATGGAGCTATTGCTGAAGTCATGAAGGAGGAAAGTGAAGTCCACATTATTCATTTTCAGATTAACCAGGGAATTCAGTGGGTAAGCCTAATCCAAGCTATTGCTGGAAGACCTGGAGCACCCCCCAAGATTAGAATAACAAGTTTTGATGACTCCACTTCAGCTTATGCCATGGAAGGAGGCCTTGAAATTGTTGGAGCAAGGTTATCAAGGCTTGCACAATCATATAATGTACCCTTTGAGTCTAATTGCTAA 1062 0.4068 MQMSQKHKMSYDSSRFSIEPVQNLGSCCFLQSGNLDYSSSSDNGSHTTYPSVCIFEQYCTLESSTNNNIPSLNSPSTVSFSPNNSPVSKLHSKAYVLSSQNLLEIVNESLENKSFLTLNDDELRHKIRELESAMLGHDTDILDTYDTIIPKESDSFLKEAERWKRMMAMISRGDLKEMLCTCAKAVAGNDMETTEWLMSELRKMVSVSGNPIQRLGAYMLEALVARLASSGSTIFKVLKCKEPTSSELLSQMHLLYEICPYLKFGYMSANGAIAEVMKEESEVHIIHFQINQGIQWVSLIQAIAGRPGAPPKIRITSFDDSTSAYAMEGGLEIVGARLSRLAQSYNVPFESNC* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1011 353 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 17 350 IPR005202 -
Gso9g1011 353 Pfam GRAS domain family 175 351 IPR005202 -
Gso9g1011 353 ProSiteProfiles GRAS family profile. 166 353 IPR005202 -
Gso9g1011 353 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 17 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1011 Gso-Chr9 28120142 28121231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1011 118 352 GRAS Transcription Factor Family AT5G48150 58.921 6.28e-94 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso9g1011 GRAS 7.9e-55 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1011 - - gmx:102663292 686.797