Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1001 ATGAAACCCACTTTCCTCCTTTCTCTCTTATTCTTCACATTCACACTCTCCCATCTCACCCCACCCGCCACCGCCGGTGACCGTTACGTTTCCGGCGACAATTCCGGCGATGCCGACTTCATCCGCGCGAGCTGCAACGCGACCCTGTACCCCGACCTCTGCTTCTCCTCCCTCTCCCGCTACGCCGCCGCCGTGCAGAGCAGCCACGCCGCCCTAGCACGCGTCGCCGTCGCCGTGGCCCTCGCCAAGGCCCACGGCGCCGCGGCCTACCTCTCGCACCAGACCGCGGCGGCCAGCGACGACGACTCCGGCGCCGGCTCCGCCCTGCACGACTGCTTCTCGAACCTCGAGGACGCTGTGGACGAGATCCGTGGCTCTCTTAAGCAGATGCGCCGGCTCAAACCAGCCGGAGCCGGAAACTCTGACTCCAGCTCCGTCCGGTTTGGGCTCAGCAACGTGCTGACGTGGATGAGCGCCGCGCTCACTGACGAGGAAACGTGTACTGACGGATTCGAGGGTGTAGAGGAAGGTCCCGTGAAGACGAGCGTATGCGATCGCGTCACTAGGGTCAAGAAGTTCACCAGCAATGCCTTGGCGCTGGTTAACGGTTTCGCTAATAACTTATAG 627 0.63 MKPTFLLSLLFFTFTLSHLTPPATAGDRYVSGDNSGDADFIRASCNATLYPDLCFSSLSRYAAAVQSSHAALARVAVAVALAKAHGAAAYLSHQTAAASDDDSGAGSALHDCFSNLEDAVDEIRGSLKQMRRLKPAGAGNSDSSSVRFGLSNVLTWMSAALTDEETCTDGFEGVEEGPVKTSVCDRVTRVKKFTSNALALVNGFANNL* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1001 208 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 4 207 - -
Gso9g1001 208 PANTHER PECTINESTERASE INHIBITOR-LIKE 4 207 - -
Gso9g1001 208 CDD PMEI-like_3 43 206 - -
Gso9g1001 208 TIGRFAM PME_inhib: pectinesterase inhibitor domain 7 202 IPR006501 GO:0004857
Gso9g1001 208 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 204 IPR035513 -
Gso9g1001 208 Pfam Plant invertase/pectin methylesterase inhibitor 39 200 IPR006501 GO:0004857
Gso9g1001 208 Gene3D Invertase/pectin methylesterase inhibitor family protein 36 204 IPR035513 -
Gso9g1001 208 SMART PMEI_2 36 200 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1001 Gso-Chr9 27652066 27653010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1001 41 208 Carbohydrate Esterase AT5G53370 28.824 3.15e-14 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1001 - - gmx:100797734 366.311