Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0999 ATGAGCAAACGCAACACTTTCTTTCACAATCTCATCAAGCCCTTCAAATTCAGCCCCAGCAAAGAGGGACAAAGCGAAGTAGAAGAAATAAAGAACCTAGCTGCACAAGAGCAAAAGATCTTCCCCTACGAAACATTGGTTGCTGCTACCAACAAATTTCACATTCTTAACAAGCTAGGTGAGGGAGGATTTGGACCCGTCTATAAGGGTAAATTGAATGATGGGAGAGAGATTGCGGTGAAGAAGTTATCGCATAGATCGAATCAAGGGAAGACGCAGTTCGTTAACGAGGCAAAGTTGTTGGCACGTGTACAGCACCGTAATGTGGTGAGTTTGTTCGGTTATTGTACCCATGGCTTCGAAAAGCTTCTTGTTTACGAGTATGTCCTTCACGAGAGCCTCGACAAGCTTCTCTTCAAATCCCATAAGAAAGAACAGCTAGATTGGAAACGTAGGTTTGACATAATCAATGGGGTGGCAAGAGGGTTGCTTTATCTACACGAAGACTCTCACAACTGCATTATACATCGCGACATAAAGGCAAGTAACATCTTACTCGATGAAAATTGGGTGCCCAAGATTGCAGATTTCGGCCTCGCACGACTCTTCCCCGAAGACCAAACCCATGTCAACACACGTGTGGCTGGAACCAATGGCTATTTGGCTCCGGAGTATCTAATGCATGGACATTTAACCGTGAAGGCTGACGTATTTAGCTATGGGGTTTTGGTGTTGGAATTGGTCAGTGGCCAGCGAAATTCATCCTTTGATATGGACGTGAGTGCACAGAATCTCGTCGACTGGGCATACAGGCTATACAAGAAAGGGAGGGCCTTAGAAATCGTGGACCCAACACTGGCCTCATCAGTGGTAGCAGAACAAGCAGAAATGTGCATTCAACTGGGTCTACTCTGCACTCAAGGGAATCAAGACCTGCGTCCAAGCATGGGTCGTGTGATGGTGATTCTGTCAAAGAAACCACCATGCCACATGGAAGAACCAACAAGGCCAGGAATAGCCGGTTCGAGATACAGAAGAAGAGTATCTCGCGGTCGCAGACCCTCTGCAACAACTTCTGGGGAAGTTGATGATGACTCCTCTGTTAATTCGCAAACTTTTGATTCTTCAAGCAACTATGGCACTAACACTACTACTTCTGCAACAACACCAACAACAAGAAGCTCCAATACTACTGCAGAAGTAGTGGACCGGCGAGGGAAACGACCCATGCAAGGTGGTTAG 1242 0.463 MSKRNTFFHNLIKPFKFSPSKEGQSEVEEIKNLAAQEQKIFPYETLVAATNKFHILNKLGEGGFGPVYKGKLNDGREIAVKKLSHRSNQGKTQFVNEAKLLARVQHRNVVSLFGYCTHGFEKLLVYEYVLHESLDKLLFKSHKKEQLDWKRRFDIINGVARGLLYLHEDSHNCIIHRDIKASNILLDENWVPKIADFGLARLFPEDQTHVNTRVAGTNGYLAPEYLMHGHLTVKADVFSYGVLVLELVSGQRNSSFDMDVSAQNLVDWAYRLYKKGRALEIVDPTLASSVVAEQAEMCIQLGLLCTQGNQDLRPSMGRVMVILSKKPPCHMEEPTRPGIAGSRYRRRVSRGRRPSATTSGEVDDDSSVNSQTFDSSSNYGTNTTTSATTPTTRSSNTTAEVVDRRGKRPMQGG* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0999 413 ProSiteProfiles Protein kinase domain profile. 53 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0999 413 MobiDBLite consensus disorder prediction 353 399 - -
Gso9g0999 413 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 3 380 - -
Gso9g0999 413 Gene3D Transferase(Phosphotransferase) domain 1 130 332 - -
Gso9g0999 413 Pfam Protein kinase domain 53 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0999 413 SUPERFAMILY Protein kinase-like (PK-like) 38 331 IPR011009 -
Gso9g0999 413 Gene3D Phosphorylase Kinase; domain 1 16 128 - -
Gso9g0999 413 CDD STKc_IRAK 59 325 - -
Gso9g0999 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
Gso9g0999 413 SMART serkin_6 53 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0999 413 PANTHER RECEPTOR-LIKE KINASE 3 380 - -
Gso9g0999 413 MobiDBLite consensus disorder prediction 328 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0999 Gso-Chr9 27567900 27580160 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0999 25 340 Receptor kinase-like Gene Family AT4G11530 49.371 2.96e-106 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso9g0999 Pkinase 2.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0999 - - gmx:100499639 791.956