Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0967 ATGACGTCACCCCGTTCCCCTTACCTCCTCCTTGCCACCGCCTTTTTCCTGTCGTTTCACCTCTCCTATGTCGTCCACTCCGCCTCCGACTTCCAAGCACTAATGTCGTTCAAAGCCTCCTCCGACCCTTCCAACAAACTCCTCTCTCAATGGAACTCCACGTCCTCCAACCCCTGCACCTGGCACGGCGTCTCCTGCAGCCTCCACAACAACAACCACCACCACCGCCGCCGCGTCTCCGGCCTCGTCCTCGAAGACCTCAACCTCACCGGCTCCATCCTCCCCCTCACCTTCCTCACCGAGCTCCGCATCCTCAGCCTTAAACGCAACCGTTTCGACGGTCCCATTCCCTCCCTCTCCAACCTCACCGCTCTCAAGCTCCTCTTCCTCTCCCACAACAAATTCTCCGGCAAGTTTCCCGCCACCGTCACTTCCCTCCCCCACCTCTACCGCCTTGACCTCTCCTACAACAACCTCTCCGGTCAGATTCCGGCAACTCTCAACAACTTAACCCACCTCCTCACCCTCCGCATTAATACCAACAACCTCCGTGGCCGCATTCCCAACATCAACAACCTTTCTCATCTTCAAGACTTCAACGTCTCCGGTAACCGCCTCTCCGGTAAAATACCGGATTCGCTTTCAGGTTTCCCCGGATCCGCGTTTTCTAACAACCTTTTCCTCTGCGGAGTTCCGTTACTAAAATGCAGAGGCGGCGAGACAAAAGCCATACCCGCTCTCGCTTCCCCGTTGAAGCCTCCAAACGACACAGATTTGCATCATAAGAGTAAAACTCACGTGGCAGCGCCCAGAATGGGGGTGATGGTTTTGGTTATAATTGTTCTCGGCGACGTGTTGGTTCTTGCTTTGGTGTCTCTGATCCTCTACTGCTATTTCTGGCGGAACTATTCTGTTTCGTTAAAAGAAGTAAAAGTAGAGACCCATTCGAAGTCGAAGGCAGTGTATAAGAGGAAGGTAAACAGTGAGGGGATGGTGTTTTTGGAAGGGGTGAGGAGGTTTGAGTTGGAGGAGCTGCTGTGTGCGTCTGCGGAGATGTTGGGGAAGGGCGTGTTTGGCACGGCGTATAAAGCTGTGCTCGATGATGGGAACGTTGTAGCGGTGAAGAGGCTGAAAGAAGTGAGTGTTGGAGGGAAGAGGGAGCTTCAGCAGCGGATGGAAGTGCTTGGAAGGTTGAGACACTGCAATGTTGTTCCTTTGAGGGCTTACTATTTCGCTAAAGATGAGAAGCTGCTCGTGTCCGATTACATGCCCAATGGTAACTTGTCCTGGCTCCTCCACGGTAATCGAGGACCGGGACGGACCCCACTGGATTGGACCACGCGGCTGAAGCTCGCAGCTGGAGTGGCACGAGGCATAGCCTTCATTCACAACAGTGATAATAAACTCACCCACGGTAACATCAAATCCACGAACGTCCTCGTCGACGTGGCGGGCAAGGCGCGCGTGTCGGATTTCGGGCTCTCCTCCATCTTCGCGGGCCCCACGAGTTCTCGATCCAACGGCTACCGCGCGCCGGAGGCATCATCGGACGGCCGGAAGCAGACCCAGCTGTCCGACGTGTATTCCTTCGGCGTCCTCCTGATGGAGATTCTGACGGGGAAATGCCCCTCCTTCGAGGTGGACGGCGGCTGCGCCACGGCGGTGGAGCTTCCCCGGTGGGTCCGGTCGGTGGTGAGGGAGGAGTGGACGGCGGAGGTGTTCGATCTCGAGCTTATGAGGTACAAGGACATTGAGGAGGAGATGGTGGCGCTGCTGCAAATTGCTATGGCGTGCACTGCGACCGTGCCTGATCAACGGCCCAGGATGAGCCACGTATCGAAAATGATCGAGGAGTTGAGTGGGGTCCACGTGTCACAGTCTCATGACGCGTTGGACTCAGTTTCGGAGTCACCTTCCGCGCCTGAAGATGCTTGTACAGGACGAGATGGTCCGGCTAGTGCTAGTCAATGA 1971 0.5586 MTSPRSPYLLLATAFFLSFHLSYVVHSASDFQALMSFKASSDPSNKLLSQWNSTSSNPCTWHGVSCSLHNNNHHHRRRVSGLVLEDLNLTGSILPLTFLTELRILSLKRNRFDGPIPSLSNLTALKLLFLSHNKFSGKFPATVTSLPHLYRLDLSYNNLSGQIPATLNNLTHLLTLRINTNNLRGRIPNINNLSHLQDFNVSGNRLSGKIPDSLSGFPGSAFSNNLFLCGVPLLKCRGGETKAIPALASPLKPPNDTDLHHKSKTHVAAPRMGVMVLVIIVLGDVLVLALVSLILYCYFWRNYSVSLKEVKVETHSKSKAVYKRKVNSEGMVFLEGVRRFELEELLCASAEMLGKGVFGTAYKAVLDDGNVVAVKRLKEVSVGGKRELQQRMEVLGRLRHCNVVPLRAYYFAKDEKLLVSDYMPNGNLSWLLHGNRGPGRTPLDWTTRLKLAAGVARGIAFIHNSDNKLTHGNIKSTNVLVDVAGKARVSDFGLSSIFAGPTSSRSNGYRAPEASSDGRKQTQLSDVYSFGVLLMEILTGKCPSFEVDGGCATAVELPRWVRSVVREEWTAEVFDLELMRYKDIEEEMVALLQIAMACTATVPDQRPRMSHVSKMIEELSGVHVSQSHDALDSVSESPSAPEDACTGRDGPASASQ* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0967 656 ProSitePatterns Protein kinases ATP-binding region signature. 353 375 IPR017441 GO:0005524
Gso9g0967 656 Gene3D Ribonuclease Inhibitor 22 96 IPR032675 -
Gso9g0967 656 Gene3D Ribonuclease Inhibitor 97 244 IPR032675 -
Gso9g0967 656 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Gso9g0967 656 SUPERFAMILY L domain-like 27 234 - -
Gso9g0967 656 Gene3D Phosphorylase Kinase; domain 1 311 422 - -
Gso9g0967 656 MobiDBLite consensus disorder prediction 627 656 - -
Gso9g0967 656 PANTHER - 24 635 - -
Gso9g0967 656 Gene3D Transferase(Phosphotransferase) domain 1 423 637 - -
Gso9g0967 656 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 24 635 - -
Gso9g0967 656 SUPERFAMILY Protein kinase-like (PK-like) 351 616 IPR011009 -
Gso9g0967 656 ProSiteProfiles Protein kinase domain profile. 347 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0967 656 Pfam Protein kinase domain 350 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0967 Gso-Chr9 26063195 26068404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0967 29 647 Receptor kinase-like Gene Family AT1G68400 60.000 0.0 696
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso9g0967 Pkinase 2.9e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0967 - - gmx:100811051 1241.1