Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0962 ATGGAGGCGCAGCCCACTCCTCCACCTGACCCGGTGGATTCCTCCCCACACTCCTGGGACGAGCCCTGTCCTTCTCTGAGCTCCGCCAAACTCCGGCTGATGTGCAGCTACGGCGGCCACATCGTGCCCCGCCCCCACGACAAGTCACTCTGCTACGTCGGCGGCGACACCCGAATCGTCGTCGTCCCCCGCCACGTCACTCTCTCGGAGCTCTCCACGCGCCTCTCGAAGTCGTTCCTCCACGCGCGCCCCTTCGTGCTTAAGTACCAGCTCCCCAGCGAGGACCTCGACTCCCTCGTCTCCGTCACCACTGACGAAGACCTCGAGAACATGATCGATGAGTACGATCACCGCTCCGGAAACAATAACAATAATAAACCTTCTTCACGAATTCGCCTCTTTCTTTTTCCGTCCCAGCCCGACTCGGTCCACGGGCCCGCGGGCTTGGGCTCTGTCAAGTCCGAGGAGTGGCTCAGTGGGTCCCTTGACGGAGGCTTATCTGAGTCCGCCTCCGTCAATTGCATCCTCGGACTCGACGACGAGGTTGCTTCTGCTTCTGCTGCAGCGAACAGCAATGGTAACAGTGGGAAAGTTTTCAAGGATGTGGTGTCGGATTCGCCTATGCTTGAGAGCAATTCGTCTTTCGGTTCTGGTTCCTCTGTGCCGCCGAATTTGCCGCCGATAAAGGTTCACGTGGAGATTGAGGAACAGTTTGCTCAGTTGGGGGTAGGACAGAAGCAACAAGAAGATGAAGGTTTTGTTGCGCCGGTGCCGGTGATGGAATTTTCCACGAACCGCCTTGTCTCCGATGACGAGAGATCCGATCATGGGGTCCCTCTTGGGCATAGAAAATCGCCAACCCCGCCGCTACAGCCTCAGCCTCACCAATTTCAACAGAAATCACCTCATGGTGTTGTTGATTTGCCTTCCCCTGATTCACTTTCAAGTGATAGTAGTCTTTCAAATGCAATGTTGCGCCCGAAACCAGCCATTTATCAAGACCAAGTTCAAATTCAATATGGAAGTTCTCAGGTTCCTAGCAATGCCTCGGTTGATCCAAAGCTTAATGTGACTGATCAACAAGGTTGGATTCAGATGCAGCAGCATGTGCAGGAAGCTGGATATGTTTTGCAGCCACAATTTGATCAACTGCCACTGCCGCAGCAGCATCAGACTCAGCCGCCGCAGCAGCAGCATCAACCACAGCAGTATATCCACAACACACATTTAATTCACCATACCCTTTCAGGGTCTGTGCCAATCCCCGCCTCATACTATCCTGTATGTCAGCAACAACTCCATACCCAACATCTCCATCACCTTGATCAACAATACCCGGTTTACTATGTGCAGGCAAGACAGGCCCAACCATACAACTTGTCAGTGCAGCTGGCTAATGCAGCTGAATCTGCCACAACTATGCCTTCTAGCCAGTCCCAAAATCAACCAAGTTCTGCTGCTTACAACTCAACAAGAAATCCTAATTTTGAAATGGCAGCAGGTGCATGTAGAACCGCACCTGCCACCCGTCAATTGGTTCAAGTTTCTTCTAGTAAGCATCAACAGCAATATGTTGCTCACTCTCAAATTTATCATCACCATCCTCAATCGATGCCTCCTAAGTCTGCAGTACCTGCAAATTATGCTTACAACTATGCAGATCCTGCACTTGCTCAAGTGTTTTATAGTCAACCTTTGGCACCCTTCATGCCTTCACACTACCAGACCATGACAGCTGCTTCTGTAATGCGGACGGAAGTTTCTGCTAAGCTTCCCTCCGACAGCATGAAGAAGCCGCAGCAGGTGACAACCTCGCAGCCATTGTGA 1827 0.5205 MEAQPTPPPDPVDSSPHSWDEPCPSLSSAKLRLMCSYGGHIVPRPHDKSLCYVGGDTRIVVVPRHVTLSELSTRLSKSFLHARPFVLKYQLPSEDLDSLVSVTTDEDLENMIDEYDHRSGNNNNNKPSSRIRLFLFPSQPDSVHGPAGLGSVKSEEWLSGSLDGGLSESASVNCILGLDDEVASASAAANSNGNSGKVFKDVVSDSPMLESNSSFGSGSSVPPNLPPIKVHVEIEEQFAQLGVGQKQQEDEGFVAPVPVMEFSTNRLVSDDERSDHGVPLGHRKSPTPPLQPQPHQFQQKSPHGVVDLPSPDSLSSDSSLSNAMLRPKPAIYQDQVQIQYGSSQVPSNASVDPKLNVTDQQGWIQMQQHVQEAGYVLQPQFDQLPLPQQHQTQPPQQQHQPQQYIHNTHLIHHTLSGSVPIPASYYPVCQQQLHTQHLHHLDQQYPVYYVQARQAQPYNLSVQLANAAESATTMPSSQSQNQPSSAAYNSTRNPNFEMAAGACRTAPATRQLVQVSSSKHQQQYVAHSQIYHHHPQSMPPKSAVPANYAYNYADPALAQVFYSQPLAPFMPSHYQTMTAASVMRTEVSAKLPSDSMKKPQQVTTSQPL* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0962 608 MobiDBLite consensus disorder prediction 1 15 - -
Gso9g0962 608 MobiDBLite consensus disorder prediction 266 280 - -
Gso9g0962 608 CDD PB1_UP2 34 136 - -
Gso9g0962 608 Pfam PB1 domain 46 137 IPR000270 GO:0005515
Gso9g0962 608 SUPERFAMILY CAD & PB1 domains 46 144 - -
Gso9g0962 608 SMART PB1_new 45 138 IPR000270 GO:0005515
Gso9g0962 608 PANTHER EXPRESSED PROTEIN 5 597 - -
Gso9g0962 608 MobiDBLite consensus disorder prediction 1 23 - -
Gso9g0962 608 MobiDBLite consensus disorder prediction 589 608 - -
Gso9g0962 608 PANTHER OS05G0427100 PROTEIN-RELATED 5 597 - -
Gso9g0962 608 MobiDBLite consensus disorder prediction 594 608 - -
Gso9g0962 608 MobiDBLite consensus disorder prediction 265 321 - -
Gso9g0962 608 Gene3D - 50 137 - -
Gso9g0962 608 MobiDBLite consensus disorder prediction 471 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0962 Gso-Chr9 25480614 25483646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0962 30 192 MAP Kinase Kinase Kinase AT3G46920 38.037 8.99e-26 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0962 - - gmx:100805172 1067.76