Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0958 ATGAACCCAAAACAGCTCCTCCTCCTCTTCTTTTCTCTCTTTCTCACAATCACTTTCTCGTTGAACGAAAGATTTGAAGCCTGCGATGCCAAGACATGTGGGAACGGGCAGAACATAAGCTACCCATTCTACATCCAAGGCAAGCAAAAACCCTTTTGCGGGCAGCCAGGCTTCGAGCTAACGTGCAGCCACAACGGTTTCCCAATTCTGACTCTCATGTACACCCCATACACAATCCACCAAATTTTCTACGACAACCAATCTCTCCGAGTGTCCAATCCCGTCTTTTCACAACCAAACCTTTCTTCTTGTATTGCCCCGACTCAGAACCTCACGGTCGGAAGGTACAGATTCCGAGTCGCTCCGAACCAGAGGGAACTGTTCGTGCTGTACGGCTGCGACTCAGCGGCGCTTCAGAAAACGGTGCCGGAGCGGAGGATCTGGTGTTCTGCGGCGGGAAACGAAACGACGTCGGTTGTGGGGTTGGATAAGGGGGATCGGGATTTGGTTTCGGCGCGGGAGAGTTGTAAGGGTGGTGCTGTGAATGCGACGGTGGATGATTTGAAAGGAGGGGTTAGAGAGGCGCTGCAGAGAGGGTTTTTGTTGCTTTGGAATGCGACTAGCTGCAGCGAGTGCAAGAGTAGTGGAGGGAGGTGCGGCTTCGACATCGACCCTCGTGTCTATGCTTTTAGGTGTTACTGTCCTGATAGGCCTCATGCTGTCAAATGTACCAATACAGGTACAAAGGGGTTGAGTAAGGCAGGAAAACTAGTCATAGGTTTAAGTGTTGTAATCCTATGCATGTTGATGATTGGGTTGCTCTTACATTGCAAAAGAAAACACAGTTCCTCAAGTGGTCAATTCCAAACAAGAAATACTTTTTCTATTCCCTCCTCACCAAATGCAGAAGTCGAAAGTGGCAGTGTGTACTTTGGAGTTCCTCTCTTCTCCTACAAGGAGCTTGCAGAAGCAACAAACCGTTTTGACCTTAATAAACAAATTGGAGATGGAGGCTTTGGGACTGTCTACAATGGGAAACTCAAAGATGGAAGGGAAGTTGCAGTGAAGCACTTGTATAATCATAACTACAGGCGAGTAGAACAGTTCATGAATGAAATTCAGATCCTCACACGTTTGCGCCACAGAAATCTTGTGTCACTCTATGGCTGCACTTCACGTCAGAGCCGTGAACTGCTGCTTGTGTATGAATACATTCCAAATGGCACAGTAGCCAGCCATCTCCATGGGGAATTGGCAAAGCCTGGCTTACTAACGTGGTCCTTACGAATCAAAATCGCACTAGAGACTGCTAGTGCATTGTCTTATCTTCATGCTTCTAAAATCATTCACCGCGATGTCAAAACTAACAACATTCTTCTTGACAACAGTTTCTGTGTTAAAGTTGCAGATTTTGGCCTTTCAAGACTATTCCCCAATGACATGACTCATGTCTCCACAGCACCACAAGGGACCCCGGGTTACGTTGACCCGGAATATCACCAATGCTACCAGCTAACTAGCAAGAGTGATGTGTATAGCTTTGGAGTTGTGCTCATTGAGCTAATATCATCTATGCCAGCTGTTGACATGAACAGGCATAAGGATGAAATTAACTTGTCAAATCTAGCCATAAAGAAGATCCAAGAAAGGGCATTGAGTGAACTGGTCGACCCTTATTTGGGTTTTGATTCAGACAAAGAGGTGAAGAGGATGATAGTTGAGGTGGCAGAGTTGGCCTTTCAATGTTTGCAACAGGACAGGGAATTGAGACCTCCCATGGATGAAGTCCTTGAGGTATTGAAGAGAATTGAAAGTGGGAAGGATGAGCTAAAGCATCTAGAAGAAGCAGTTCATGGTTCTGGTTCTGGGGTTTCACATAATGTAACAACCTCATCATTGGATGAAGCTGGATTGTTGAAGAATAGGAAGCCACCTTCTTCACCAATATCCGTTACTGATAGTTGGGAAAGTAAATCCACTACGCCTAATGCCAGTTCTTAA 2001 0.4608 MNPKQLLLLFFSLFLTITFSLNERFEACDAKTCGNGQNISYPFYIQGKQKPFCGQPGFELTCSHNGFPILTLMYTPYTIHQIFYDNQSLRVSNPVFSQPNLSSCIAPTQNLTVGRYRFRVAPNQRELFVLYGCDSAALQKTVPERRIWCSAAGNETTSVVGLDKGDRDLVSARESCKGGAVNATVDDLKGGVREALQRGFLLLWNATSCSECKSSGGRCGFDIDPRVYAFRCYCPDRPHAVKCTNTGTKGLSKAGKLVIGLSVVILCMLMIGLLLHCKRKHSSSSGQFQTRNTFSIPSSPNAEVESGSVYFGVPLFSYKELAEATNRFDLNKQIGDGGFGTVYNGKLKDGREVAVKHLYNHNYRRVEQFMNEIQILTRLRHRNLVSLYGCTSRQSRELLLVYEYIPNGTVASHLHGELAKPGLLTWSLRIKIALETASALSYLHASKIIHRDVKTNNILLDNSFCVKVADFGLSRLFPNDMTHVSTAPQGTPGYVDPEYHQCYQLTSKSDVYSFGVVLIELISSMPAVDMNRHKDEINLSNLAIKKIQERALSELVDPYLGFDSDKEVKRMIVEVAELAFQCLQQDRELRPPMDEVLEVLKRIESGKDELKHLEEAVHGSGSGVSHNVTTSSLDEAGLLKNRKPPSSPISVTDSWESKSTTPNASS* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0958 666 MobiDBLite consensus disorder prediction 634 666 - -
Gso9g0958 666 Pfam Wall-associated receptor kinase galacturonan-binding 28 92 IPR025287 GO:0030247
Gso9g0958 666 Coils Coil 530 550 - -
Gso9g0958 666 Gene3D Transferase(Phosphotransferase) domain 1 405 616 - -
Gso9g0958 666 MobiDBLite consensus disorder prediction 645 666 - -
Gso9g0958 666 Pfam Protein kinase domain 330 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0958 666 SMART serkin_6 328 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0958 666 Pfam Wall-associated receptor kinase C-terminal 187 236 IPR032872 -
Gso9g0958 666 Coils Coil 596 616 - -
Gso9g0958 666 Gene3D Phosphorylase Kinase; domain 1 300 404 - -
Gso9g0958 666 PANTHER WALL-ASSOCIATED KINASE-LIKE PROTEIN 15 665 - -
Gso9g0958 666 ProSitePatterns Protein kinases ATP-binding region signature. 334 356 IPR017441 GO:0005524
Gso9g0958 666 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 15 665 IPR044652 -
Gso9g0958 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Gso9g0958 666 SUPERFAMILY Protein kinase-like (PK-like) 309 602 IPR011009 -
Gso9g0958 666 ProSiteProfiles Protein kinase domain profile. 328 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0958 Gso-Chr9 24384436 24394025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0958 230 666 Receptor kinase-like Gene Family AT1G25390 56.570 9.11e-167 490
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Gso9g0958 Pkinase 3.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0958 - - gmx:100786779 1316.21