Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0950 ATGAGTAGCAATGATCAAACTTCTGGTGCTAGTCTCTACATTAGGGCTTTAATTTGCAACGCTGCTGCTGGTGCCTCTGCTGGGGCAATAGCGGCTACATTTGTGTGCCCATTGGATGTGATCAAGACTAGGCTACAAGTTCATGGCCTTCCTCATGGGCAGAAAGGTAGTGTCATTATCACAAGCTTGCAAAATATAGTAAGGAATGAAGGTTTCAGGGGAATGTACCGTGGCCTTTCACCAACAATAGTGGCATTACTTCCAAACTGGGCAGTTTATTTCACAAGTTATGAGCAACTAAAGGGTCTTCTTCGTTCACGTGATGGTTGCGATGAACTCACAACTATTGGAAATATTATAGCTGCTGCTGGTGCTGGTGCAGCCACTGCAATTTCTACAAATCCATTGTGGGTTGTTAAGACAAGACTTCAAACACAAGGAATGAGGCCTGATGTTGTTCCTTACAAGAGTGTTCTTTCTGCTTTGACAAGGATTACACATGAGGAAGGCATACGAGGCTTATATAGTGGCATTGTTCCTTCATTGGCTGGCGTAAGTCATGTTGCAATTCAATTTCCAGCATATGAAAAGATCAAGTCATACATGGCAGAAAAAGACAACACAACCGTTGACAAGCTAACTCCTGGGAGTGTTGCCATTGCATCATCAATTTCAAAAGTATTTGCCTCTGTAATGACTTATCCACATGAGGTAATACGATCCCGGCTGCAAGAGCAAGGCCAGGCCAAAAATATTGGGGTCCAGTATACAGGGGTTATTGACTGTACTAAGAAGGTGTTTCAAAAGGAAGGCATTCCAGGCTTTTATCGCGGTTGCGCGACCAATCTATTAAGAACAACTCCATCTGCAGTTATTACATTCACTAGTTATGAGATGATACACAGGTTTTTGGAGCGGGTTGTACCTCAGGACAGAGGGTATCCGCATGGCCGTTCTAAAGCCAATGCAGTTAACAAGCCCCAGCCAAAAGCCAGTGGCAGTGACAGTGACGCAGATAGGCGGCAACCACCATCTCAGTCTAACACTAAAGCTTCATCAATTCCTCATGAAAACAAAGAGCAGCTAAAAAGACATTGA 1098 0.439 MSSNDQTSGASLYIRALICNAAAGASAGAIAATFVCPLDVIKTRLQVHGLPHGQKGSVIITSLQNIVRNEGFRGMYRGLSPTIVALLPNWAVYFTSYEQLKGLLRSRDGCDELTTIGNIIAAAGAGAATAISTNPLWVVKTRLQTQGMRPDVVPYKSVLSALTRITHEEGIRGLYSGIVPSLAGVSHVAIQFPAYEKIKSYMAEKDNTTVDKLTPGSVAIASSISKVFASVMTYPHEVIRSRLQEQGQAKNIGVQYTGVIDCTKKVFQKEGIPGFYRGCATNLLRTTPSAVITFTSYEMIHRFLERVVPQDRGYPHGRSKANAVNKPQPKASGSDSDADRRQPPSQSNTKASSIPHENKEQLKRH* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0950 365 MobiDBLite consensus disorder prediction 311 365 - -
Gso9g0950 365 ProSiteProfiles Solute carrier (Solcar) repeat profile. 15 103 IPR018108 -
Gso9g0950 365 SUPERFAMILY Mitochondrial carrier 19 299 IPR023395 -
Gso9g0950 365 PRINTS Mitochondrial carrier protein signature 20 33 IPR002067 GO:0055085
Gso9g0950 365 PRINTS Mitochondrial carrier protein signature 33 47 IPR002067 GO:0055085
Gso9g0950 365 PRINTS Mitochondrial carrier protein signature 78 98 IPR002067 GO:0055085
Gso9g0950 365 PRINTS Mitochondrial carrier protein signature 128 146 IPR002067 GO:0055085
Gso9g0950 365 PRINTS Mitochondrial carrier protein signature 222 244 IPR002067 GO:0055085
Gso9g0950 365 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 4 320 IPR044712 GO:0006862|GO:0055085
Gso9g0950 365 PANTHER BNAA09G28490D PROTEIN 4 320 - -
Gso9g0950 365 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 303 IPR018108 -
Gso9g0950 365 MobiDBLite consensus disorder prediction 325 355 - -
Gso9g0950 365 Pfam Mitochondrial carrier protein 20 105 IPR018108 -
Gso9g0950 365 Pfam Mitochondrial carrier protein 214 305 IPR018108 -
Gso9g0950 365 Pfam Mitochondrial carrier protein 113 204 IPR018108 -
Gso9g0950 365 Gene3D Mitochondrial carrier domain 15 304 IPR023395 -
Gso9g0950 365 ProSiteProfiles Solute carrier (Solcar) repeat profile. 113 201 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0950 Gso-Chr9 24165673 24172035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0950 33 356 Chloroplast and Mitochondria Gene Families AT1G25380 66.463 7.54e-151 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0950 K15115 - gmx:100816376 711.064