Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0949 ATGATGGCAAACAGTTGTGTTTCAATGGACAATAATAATATCCTGGGTCTTCTCAAGCTTCGAATTAAAAGAGGCGTTAATCTTGCAATTCGCGATGCTCGTACCAGCGATCCGTATGTCGTCGTCAACATGGGTGATCAGAAGCTGAAGACTCGTGTCGTAAAAAACAACTGCAACCCTGACTGGAATGAAGAATTGACCCTTTCTGTAAAGGACGTTAAAACCCCAATACATCTGACGGTTTATGACAAAGACACTTTCTCTGTTGATGACAAAATGGGTGAGGCAGAGATAGACTTAAAACCATATGTTCAGTGTAAGCAGATGGGATTGGGCAAGCTCCCAAATGGTTGTTCACTCAAGAGAATTCAACCAGATAGAACTAATTACCTTGCTGAAGAGAGCAGCTGCATTTGGCAAAATGGAAAGATTGTCCAAGAAATGTTTTTGAGATTGAGAAATGTTGAGAGTGGAGAAATACTTGTGGAAATTGAGTGGGTTGATGTTGTTGGTTGCAAGGGCTTATCAGAGGCAAAATAA 540 0.4093 MMANSCVSMDNNNILGLLKLRIKRGVNLAIRDARTSDPYVVVNMGDQKLKTRVVKNNCNPDWNEELTLSVKDVKTPIHLTVYDKDTFSVDDKMGEAEIDLKPYVQCKQMGLGKLPNGCSLKRIQPDRTNYLAEESSCIWQNGKIVQEMFLRLRNVESGEILVEIEWVDVVGCKGLSEAK* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0949 179 CDD C2_ArfGAP 15 158 - -
Gso9g0949 179 Pfam C2 domain 17 102 IPR000008 -
Gso9g0949 179 ProSiteProfiles C2 domain profile. 1 113 IPR000008 -
Gso9g0949 179 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 10 13 173 - -
Gso9g0949 179 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 14 167 IPR035892 -
Gso9g0949 179 SMART C2_3c 17 112 IPR000008 -
Gso9g0949 179 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 13 173 IPR044562 -
Gso9g0949 179 Gene3D C2 domain 12 172 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0949 Gso-Chr9 24010460 24019836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0949 48 176 C2H2 Transcription Factor Family AT1G70790 66.412 8.03e-60 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0949 - - gmx:100788395 359.377