Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0925 ATGTATCATTTTTCGCAGGTGTCAAACGGAGAACACAGCAGTGTAGCCAACGTTGGAGGCTTAGAAACAGACAGCTTCAACTTCCAACAACATGTGTTTGATGCTCAATTTTCGTGTTTGAAGTTCGATTCACAAAACTTGTTGTGTCAATCTTCTGGGGACAACTCTGCTCCAATATTATTCGGAAGTGTTGTTGATTCTTTCTTGTCCAGTGATGAAGACACGTTTTGTGACACATATAGTGAATATAGTGAACTTCCTTGCCATGAAGTGTCACTTTATGAGCATTTCAGACACGAAAACAACATCTTGGAGAGTAATTATTCTGCCCCAGTTAATGAGGTTGAGGTTGTTTGTGCTACTTCTGGCATGGTTCCAACTAGGAAAAACAGAATAAAATGGACCAAAGATTTACATGAACAATTTGTTGTGGCGGTCAATAGCCTTGGTGGTCCTCAAAAAGCAAAACCCAAGGCAGTGCTACAGATGATGAATTCAAAGTTGCTTACCATTTTTCATGTTAAAAGTCACTTGCAGAAATATCGGACCACAATGTACATGCAAAACACTACCAAGGAGGGGTACAAAGAAAGCCAAGGCAGAGACATGGTCACGGAACTTCAACAGAAAATCTATATGCAACTTGAGGAATCAAGACTACTGCAACTTGAGATTGAGAGAGGTATTCAAGAACAATTGAAGGCTCAACGAAATTTGCAAATGCTAGTCGAAGAACAAAAGGAGCAAGTCAATAGTGTAACTGGTCAAAATCAAACAAAGCAAACTGGAGGATCCAAATCTTTGGAAGAAAAATAA 816 0.3934 MYHFSQVSNGEHSSVANVGGLETDSFNFQQHVFDAQFSCLKFDSQNLLCQSSGDNSAPILFGSVVDSFLSSDEDTFCDTYSEYSELPCHEVSLYEHFRHENNILESNYSAPVNEVEVVCATSGMVPTRKNRIKWTKDLHEQFVVAVNSLGGPQKAKPKAVLQMMNSKLLTIFHVKSHLQKYRTTMYMQNTTKEGYKESQGRDMVTELQQKIYMQLEESRLLQLEIERGIQEQLKAQRNLQMLVEEQKEQVNSVTGQNQTKQTGGSKSLEEK* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0925 271 Pfam Myb-like DNA-binding domain 133 182 IPR001005 -
Gso9g0925 271 SUPERFAMILY Homeodomain-like 127 183 IPR009057 -
Gso9g0925 271 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 129 183 IPR006447 GO:0003677
Gso9g0925 271 MobiDBLite consensus disorder prediction 246 264 - -
Gso9g0925 271 Gene3D - 128 187 - -
Gso9g0925 271 MobiDBLite consensus disorder prediction 246 271 - -
Gso9g0925 271 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 63 267 IPR044848 GO:0003700
Gso9g0925 271 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 63 267 - -
Gso9g0925 271 Coils Coil 229 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0925 Gso-Chr9 21695488 21698159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0925 127 246 G2-like Transcription Factor Family AT4G28610 47.541 2.53e-30 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gso9g0925 Myb_DNA-binding 1.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0925 - - gmx:100797195 544.273