Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0924 ATGAATGAGAACAGGATTGATTCATGTGTAGGACGGATTCAACAAAGCTATGGTCTAAATGGTGATTGGAACTCTGAGTTTGGAAATTGTTCTAGTCAATATTTTGATATGAGACAGGCTTCAAATATGGGAACTAGCAATCAGCCACTTGCCATGGCAAGTGGTGGAGGAGTGGAACAAGAACCAAACATAGGCCAAACCAAATCATCTAGCAGCATTATAAGCCGTTTTGAGTCACCAGCTTCAGCCTTTTATGCAACAGAAATGTGCATGGGTGGTTTCCCACAATATGATAGCCAAATTGGTAATAATCTCTCTTTGATGTCTCAGTCCTCTAAGTTTAGTAATATGGAATTCCCTTTGTATCAATCTCCCAGGCAAAGCCTTTTCATGGCTTCATTAGCAAACCAACCTCCCCCCAACTTTGACTTGTCAAATCCCTTGCAAGAAATTCTCAAATCTCATTTGAATAGTGATCAATGTGTTAGATCTCCTGAAGACTCTAATAAAATCCCATATGGGGATTTTCCTGGCAGCAATTTTCTTCCAATTGAACAACATAAGTTTTTCATTGATGATGCTATCTCAACTGGTATAAGCCCTTCAATTCCTTCTAAAGGAAATCAGGATCAATCAGTTTCTTGTGGCCCATTCAATTTACCTTCTGCACAGCTTAGCTTCTCTTCTCAGCAAGAGATGCTTTCTCCAACAGGTAGCATGTCAACTACTTCTGGAAATTCTAATTCAAATGGACCAGTAGTTTCAAGTAAAACAAGAATAAGATGGACTCAGGAACTTCATGAGAAGTTTGTTGAGTGTGTGAATCGCCTTGGAGGTGCCGAGAAAGCAACACCAAAAGCTATATTAAGGCTGATGGATTCAGATGGATTGACCATCTTCCATGTTAAAAGTCATTTGCAGAAATATAGAATTGCCAAATTCATGCCACAGCCAACTCAAGGGAAATCTGACAAAAGAACCAATGTAGAGAATGTGCATCTTGATGTCAAAACTGGATTGCAAATTAAAGAGGCACTTCAGTTGCAGTTAGATGTTCAGCGGCGTCTTCATGAACAGCTAGAGATTCAGAGAAAATTACAGTTGAGGATTGAGGAGCAAGGTAAGCAGCTGAAGATGATGTTTGATCAACAGCAGAAGACAAGTAATGGCCACTTGATTACTGAGAATAATGATAGACCAATTAGTTCTAAAGATGTTCTGGTTTCCACTTCTGACGGGTCTGAAAATTCCTTATTCTCTACCAATATAAGCTAG 1275 0.3929 MNENRIDSCVGRIQQSYGLNGDWNSEFGNCSSQYFDMRQASNMGTSNQPLAMASGGGVEQEPNIGQTKSSSSIISRFESPASAFYATEMCMGGFPQYDSQIGNNLSLMSQSSKFSNMEFPLYQSPRQSLFMASLANQPPPNFDLSNPLQEILKSHLNSDQCVRSPEDSNKIPYGDFPGSNFLPIEQHKFFIDDAISTGISPSIPSKGNQDQSVSCGPFNLPSAQLSFSSQQEMLSPTGSMSTTSGNSNSNGPVVSSKTRIRWTQELHEKFVECVNRLGGAEKATPKAILRLMDSDGLTIFHVKSHLQKYRIAKFMPQPTQGKSDKRTNVENVHLDVKTGLQIKEALQLQLDVQRRLHEQLEIQRKLQLRIEEQGKQLKMMFDQQQKTSNGHLITENNDRPISSKDVLVSTSDGSENSLFSTNIS* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0924 424 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 52 422 IPR044848 GO:0003700
Gso9g0924 424 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 257 312 IPR006447 GO:0003677
Gso9g0924 424 Coils Coil 343 363 - -
Gso9g0924 424 MobiDBLite consensus disorder prediction 389 424 - -
Gso9g0924 424 SUPERFAMILY Homeodomain-like 255 311 IPR009057 -
Gso9g0924 424 Pfam Myb-like DNA-binding domain 261 310 IPR001005 -
Gso9g0924 424 Gene3D - 256 315 - -
Gso9g0924 424 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 52 422 - -
Gso9g0924 424 Pfam MYB-CC type transfactor, LHEQLE motif 340 387 IPR025756 -
Gso9g0924 424 MobiDBLite consensus disorder prediction 52 72 - -
Gso9g0924 424 MobiDBLite consensus disorder prediction 227 257 - -
Gso9g0924 424 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 256 314 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0924 Gso-Chr9 21679477 21684196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0924 240 384 G2-like Transcription Factor Family AT4G28610 60.811 4.25e-53 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gso9g0924 Myb_DNA-binding 8.1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0924 - - gmx:102668541 826.624