Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0908 ATGTTTTCGTGGCTGGCAAGGATAGTGTCGGCGTGCTTGAGACCGGTGCGGCGATATGCGCGTATGAGCAAGGATGGTGATGTCGATGACGTGTCCACCATCGGCGACGCGCTCGTGTGGGGGAAGGACCTCGAAAAACACTCGTGCGGCGAATTCTCCTACGCGGTGGTTCAGGCCAACGAGGTCATCGAGGATCACAGCCAGGTCGAGACCGGCTCCGATGCCGTCTTCGTCGGCGTCTACGACGGACACGGCGGCGCCGAAGCCTCGCGCTTCATCAACGATCATCTCTTCCTTAATCTCATCAGGGTTGCTCAAGAAAATGGTTCTATGTCTGAAGATATTATCAGAAGTGCTGTTTCTGCTACTGAGGACGGGTTTCTGACTCTTGTTCGAAGGAGTTATGGAATAAAGCCATTGATAGCAGCAATGGGTTCCTGTTGTCTGGTTGGTGTTGTCTGGAAAGGGACGCTATATATTGCGAATCTTGGAGACTCTCGCGCTGTAATTGGTTCTGTAGGTAGATCTAACAAGATCATTGCTGAGCAGTTGACCAAAGAGCACAACGCTAGCAAAGAGGAGGTTAGACGAGAACTCAGGTCTTTGCATCCAGAAGATTCACAAATTGTAGTTATGAAGCAAGGAACCTGGCGCATTAAAGGCATCATCCAGGTATCCAGATCTATAGGAGATGCATATTTGAAGCGGCCAGAGTTCTCATTTGATCCGTCATTCCCACGGTTCCACCTGCCTGAACCTATCCGCCGACCTGTGCTAACCGCAGAACCTTCTATATGTTCAAGAGTGTTAAAACCTAATGATAAGTTCATTATCTTTGCATCTGATGGACTCTGGGAACACTTGACAAACCAGGAAGCTGCTGAGATTGTTCATAACAATCCACGAATCGGTATTGCAAGAAGACTTCTTAAAGCAGCTTTAAACGAGGCAGCTAGGAAAAGGGAAATGAGATATAAAGACCTTCAGAAGATTGGAAAGGGGATTAGGCGTTTCTTCCATGATGATATCACTGTGGTTGTTGTCTTCATTGACCACGAGTTGCGCGGCAAGAATGTTACAGTTCCTGATTTGTCCATCAAAGGGTTTATTGACACAGTTGGACCATCAAATTTTAGAAATTTGCGGGGATTGGAATGA 1158 0.475 MFSWLARIVSACLRPVRRYARMSKDGDVDDVSTIGDALVWGKDLEKHSCGEFSYAVVQANEVIEDHSQVETGSDAVFVGVYDGHGGAEASRFINDHLFLNLIRVAQENGSMSEDIIRSAVSATEDGFLTLVRRSYGIKPLIAAMGSCCLVGVVWKGTLYIANLGDSRAVIGSVGRSNKIIAEQLTKEHNASKEEVRRELRSLHPEDSQIVVMKQGTWRIKGIIQVSRSIGDAYLKRPEFSFDPSFPRFHLPEPIRRPVLTAEPSICSRVLKPNDKFIIFASDGLWEHLTNQEAAEIVHNNPRIGIARRLLKAALNEAARKREMRYKDLQKIGKGIRRFFHDDITVVVVFIDHELRGKNVTVPDLSIKGFIDTVGPSNFRNLRGLE* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0908 385 Pfam Protein phosphatase 2C 69 318 IPR001932 -
Gso9g0908 385 ProSitePatterns PPM-type phosphatase domain signature. 77 85 IPR000222 GO:0043169
Gso9g0908 385 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 6 370 - -
Gso9g0908 385 SUPERFAMILY PP2C-like 56 351 IPR036457 -
Gso9g0908 385 ProSiteProfiles PPM-type phosphatase domain profile. 48 350 IPR001932 -
Gso9g0908 385 CDD PP2Cc 52 350 IPR001932 -
Gso9g0908 385 Gene3D - 38 358 IPR036457 -
Gso9g0908 385 Coils Coil 181 201 - -
Gso9g0908 385 SMART PP2C_4 45 348 IPR001932 -
Gso9g0908 385 PANTHER ALPHABET, ISOFORM E-RELATED 6 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0908 Gso-Chr9 21111954 21116576 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0908 1 378 PP2C-type Phosphatase Gene Family AT5G06750 68.557 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0908 K01102 - gmx:100778238 768.074