Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0904 ATGCAGCTCCCTTTGTTAGTCAAATATCAATTAGCAGCAATCATCTTCATTATAATATCCCTAACCAAAGTTACCTGCTTATCTTTCAATTTCTCTACCTTCGAAAGAAAGGATGAAGATCATTTATTGCTGAACAACAATTCAAAGATATTCTCATCAGCCATCCAAGTGACCCCAGATACGCGTGCACAATCAATACATAATTATTCTGGACGTGCTTTCTACAACAAGCCATACAAACTTTGGAGCCAGAAGAAGAACCAAACTGCTTCCTTCAACACCACTTTTGTGCTCAACATCGACCCCCAAACTACCCCTGCAGGTGGAGAAGGCTTGGCCTTCATCTTAACTTCAGATACCAATCTCCCAGAAAACAGTTCAGGAGAATGGCTTGGTATTGTAAATGCTACTTCCAATGGAACTTCACAAGCTGGGATTCTAGCAGTGGAGTTTGACACAAGAAACAGTTTCTCACAAGATGGCCCTGACAACCATGTTGGCATCAACATAAACAGCATCAATTCCATCAAACAGGCTCCATTAATCAACACTCGGGTCAACCTTTCATCAGGTGAACATGTCAAAATTCACATTCAGTACTTCAATGACACATTATCAGTTTTTGGTGCCATGGATGGAGCTTCAGAAGAATCTATGGAGACCCTTTTGGTATCTCCACCTCTTAATTTATCTAACTATCTTCAAGAAGAGGTTTACCTTGGTTTCTCAGCCTCAACAAGTAACTACACGCAGCTGAACTGTGTAAGATCATGGGAATTCAGTGGTGTTGATATTGCTGATGATGATAATAAAAGCCTCTTGTGGGTTTATATCACTGTTCCGATAGTGATTGTTATCATCATCATAGGAGGAATGGTGGTCTTTTTCTTGTATTGGCAAAGGAAGCGCCATATGGAAATGCCAGAAGATGCATATCCCAGGATAGAGGACCAAATTCAATATTCCTCTATGGCTCCAAAGAAGTTTGAGCTAAGGAAAATAACAAAAGCAACAGGTGAATTCAGCCCTCAAAACAAGCTTGGAGAAGGTGGATTCGGAACTGTGTACAAGGGGCTATTGGACAATAAAGAGGTAGCTGTGAAGAGAGTCTCTAAGAACTCACGCCAAGGGAAGCAAGAATTTGTGGCAGAAGTGACAACAATTGGAAGCCTTCACCACAGGAATTTGGTGAAACTCACGGGTTGGTGCTATGAGAAAAGAGAGCTTCTCCTTGTGTATGAGTTCATGCCTAAAGGAAGCCTAGACAATTACCTCTTTGGTGACAAAATTTTTGGTAACAACACCCTTGAAGAGGGGTGTTCTTCAACACTGACTTGGGAAACAAGGCACAGTGTGATTCATGGTGTGGCTCAAGCATTAGACTATCTCCACAATGGGTGTGAAAAGAGGGTTCTTCACAGAGACATCAAGGCCAGCAACATAATGTTGGACTCAGACTACAATGCCAAGTTGGGAGACTTTGGATTGGCAAGAACCATTCAGCAGAGAAATGAAACACACCACTCTACAAAGGAGATTGCAGGGACACCAGGGTACATGGCTCCAGAGACCTTTCTCACAGGAAGAGCAACAGTGGAGACAGATGTGTATGCATTTGGGGTTCTTGTGTTGGAGGTTGTGTGTGGAAGGAGGCCAGGGAGTGTGTATGCACAAGATGACTACAAAAACAGCATTGTGTATTGGGTTTGGGACTTATATGGGAAGGAGAAAGTAGTTGGTGCTGTGGATGCAAGGCTGAAGAAGGAGGAGATTAAAGAGGAAGAAGTGGAGTGTGTTCTTGTTCTTGGCTTGGCGTGTTGCCATCCAAACCCACACCATAGGCCATCCATGAGAACTGTTCTTCAGGTTCTGAATGGGGAAGCACCCCCACCTGAGGTGCCTATGGAAAGACCAGTTTTCATGTGGCCTGCTATGCCTCCATCATTCAAAGAAGCTGAAGATAACTCCCTCATCCAGGGTACACTCACTCACTTCACTGAATTCACTGGCAGATGA 2016 0.434 MQLPLLVKYQLAAIIFIIISLTKVTCLSFNFSTFERKDEDHLLLNNNSKIFSSAIQVTPDTRAQSIHNYSGRAFYNKPYKLWSQKKNQTASFNTTFVLNIDPQTTPAGGEGLAFILTSDTNLPENSSGEWLGIVNATSNGTSQAGILAVEFDTRNSFSQDGPDNHVGININSINSIKQAPLINTRVNLSSGEHVKIHIQYFNDTLSVFGAMDGASEESMETLLVSPPLNLSNYLQEEVYLGFSASTSNYTQLNCVRSWEFSGVDIADDDNKSLLWVYITVPIVIVIIIIGGMVVFFLYWQRKRHMEMPEDAYPRIEDQIQYSSMAPKKFELRKITKATGEFSPQNKLGEGGFGTVYKGLLDNKEVAVKRVSKNSRQGKQEFVAEVTTIGSLHHRNLVKLTGWCYEKRELLLVYEFMPKGSLDNYLFGDKIFGNNTLEEGCSSTLTWETRHSVIHGVAQALDYLHNGCEKRVLHRDIKASNIMLDSDYNAKLGDFGLARTIQQRNETHHSTKEIAGTPGYMAPETFLTGRATVETDVYAFGVLVLEVVCGRRPGSVYAQDDYKNSIVYWVWDLYGKEKVVGAVDARLKKEEIKEEEVECVLVLGLACCHPNPHHRPSMRTVLQVLNGEAPPPEVPMERPVFMWPAMPPSFKEAEDNSLIQGTLTHFTEFTGR* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0904 671 ProSitePatterns Protein kinases ATP-binding region signature. 347 368 IPR017441 GO:0005524
Gso9g0904 671 PANTHER - 13 662 - -
Gso9g0904 671 Gene3D Phosphorylase Kinase; domain 1 326 415 - -
Gso9g0904 671 ProSiteProfiles Protein kinase domain profile. 341 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0904 671 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 277 IPR013320 -
Gso9g0904 671 Pfam Protein kinase domain 344 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0904 671 SMART serkin_6 341 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0904 671 Pfam Legume lectin domain 27 272 IPR001220 GO:0030246
Gso9g0904 671 Gene3D Transferase(Phosphotransferase) domain 1 416 643 - -
Gso9g0904 671 Gene3D - 25 273 - -
Gso9g0904 671 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 13 662 - -
Gso9g0904 671 CDD STKc_IRAK 347 626 - -
Gso9g0904 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
Gso9g0904 671 SUPERFAMILY Protein kinase-like (PK-like) 322 624 IPR011009 -
Gso9g0904 671 CDD lectin_legume_LecRK_Arcelin_ConA 27 261 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0904 Gso-Chr9 21004991 21007295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0904 70 639 Receptor kinase-like Gene Family AT5G10530 40.816 1.09e-127 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gso9g0904 Pkinase 1.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0904 - - gmx:100790353 1315.06