Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0891 ATGTTGTGTTGTGGAGGTGCAGAAGAGGATTTTGGCATTCCACCTGGAAATCAATATAATGCATCACCTAAAAAGGGTAATGCATATAATGGTGGAGGAGGAGGTGACAGAGGCGAGCCTAGGGGTAATGTTGTAAAAAATGGTGCTCCACAAAAAACATTGCCAATTGAGATACCCGCTATTTCATTGGATGAGTTAGATCGATTAACAAGCAACTTTAGTACAGAGGCTTTGATAGGAGAAGGTTCTTATGGGAAGGTTTACTATGCAAAATTGAGCGACGGTATGGAAGCTGCAATCAAGAAGCTGGATACAAGTTCTTCCCCAGACCCTGACTCTGATTTTGCAGCACAATTATCAATTGTTTCAAGATTGAAGAATGTGCATTTTGTGGAGTTGATGGGGTATTGTCTTGAGGAAAATTATAGAATTTTGGTTTATCAATATGCAAGTTTGGGTTCTTTGCATGATGTGTTACACGGAAGAAAAGGAGTGCAAGGTGCTGAACCTGGTCCAATTTTAAATTGGAGTCAAAGAGTAAAAATTGCATTTGGTGCAGCAAAAGGACTTGAGTTTCTTCATGAAAAGTGTCAACCTTCTATAGTTCATCGCGATGTTAGATCTAGCAATGTCTTACTCTTCAATGACTATGAGTCCAAGGTTGCAGATTTCAACTTGACAAATCAATCTTCTGACACTGCAGCACGACTACATTCAACAAGAGTCTTAGGAACATTTGGCTATCATGCTCCAGAGTATGCCATGACAGGCCAAATAACCCAAAAAAGCGATGTTTATAGTTTTGGAGTTGTGCTTTTGGAACTTTTAACAGGAAGAAAGCCAGTAGACCATACAATGCCTAAAGGGCAACAAAGTCTTGTCACTTGGGCAACTCCAAGATTGAGTGAGGACAAAGTGAAACAATGTGTGGATCCTAAACTAAACAATGAATACCCACCCAAGGCAATTGCTAAGTTAGCAGCAGTTGCAGCACTTTGTGTACAATATGAAGCTGACTTTAGGCCAAACATGACTATTGTTGTCAAAGCTCTTCAACCACTTCTTAATTCAAAACCAGCTAGCGTTGATCCAGACACTTGA 1101 0.4005 MLCCGGAEEDFGIPPGNQYNASPKKGNAYNGGGGGDRGEPRGNVVKNGAPQKTLPIEIPAISLDELDRLTSNFSTEALIGEGSYGKVYYAKLSDGMEAAIKKLDTSSSPDPDSDFAAQLSIVSRLKNVHFVELMGYCLEENYRILVYQYASLGSLHDVLHGRKGVQGAEPGPILNWSQRVKIAFGAAKGLEFLHEKCQPSIVHRDVRSSNVLLFNDYESKVADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNNEYPPKAIAKLAAVAALCVQYEADFRPNMTIVVKALQPLLNSKPASVDPDT* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0891 366 ProSitePatterns Tyrosine protein kinases specific active-site signature. 201 213 IPR008266 GO:0004672|GO:0006468
Gso9g0891 366 SUPERFAMILY Protein kinase-like (PK-like) 52 351 IPR011009 -
Gso9g0891 366 ProSitePatterns Protein kinases ATP-binding region signature. 79 102 IPR017441 GO:0005524
Gso9g0891 366 Gene3D Phosphorylase Kinase; domain 1 46 149 - -
Gso9g0891 366 ProSiteProfiles Protein kinase domain profile. 73 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0891 366 PANTHER OS03G0226300 PROTEIN 1 364 - -
Gso9g0891 366 MobiDBLite consensus disorder prediction 13 49 - -
Gso9g0891 366 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 364 - -
Gso9g0891 366 Pfam Protein tyrosine and serine/threonine kinase 76 351 IPR001245 GO:0004672|GO:0006468
Gso9g0891 366 Gene3D Transferase(Phosphotransferase) domain 1 151 363 - -
Gso9g0891 366 SMART tyrkin_6 73 351 IPR020635 GO:0004713|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0891 Gso-Chr9 20242573 20246238 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0891 61 354 Trihelix Transcription Factor Family AT5G38560 46.000 3.27e-88 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Gso9g0891 PK_Tyr_Ser-Thr 8.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0891 - - gmx:100777194 691.419