Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0882 ATGGACAAGACATCATCAACAACAACAACCTCCGAGAGAGAAACTCACGACTTCATGAACGTCGACTCGTTCTCCCAACTCCCCTTCATCCGCCCGGCTCCTCTTGTCAGAGAGAAGTCAGGCATTCGCCTCTTTGGCATCGAATTTGCCGGCGGAAACAACAACAGCAGCAATAACAATAACAATTTTGTTGTTGTCTCGGCCGAGGATTCTGAGTCGGCCGAAATAACAACAGCAGCCAACACCAACACCAACATCAATAACAACAAACTCAACTCATTGGACCTCGATCCTTCCAACAAGGAGGAAAACACCCCCACTGCCACCAGTACTGGCACCACCGACACGAATGGCGAGAGCAGCCGCCGCTTCGAGTGCCACTACTGCTGCCGCAACTTCCCCACCTCCCAAGCCCTCGGCGGCCACCAAAACGCGCACAAACGCGAACGCCAGCACGCCAAACGTGCGCACCTCCAGTCCACGATGGTTCATGGCAGCACCTTCTCCGACGCGCACCATGTCTACAATCTCATGAACTACCGCTACGGTTCTTCCATTCCAACACCACCACCACCAACAATGCCTTATCCAACATGGAACAACAACAACAACAACACGCGCTTCTACGGAACAACAACAACGACGTCGTTTTCTCACCACCACCAACACCAACAACAACCTATTAACGGAAGCCCCTTAGCATTTTGGCGAATTCCTAATGGCACCACCATTAATAATAATAACCCTAGTTTCAGCCACGAGCGTTCTTCGACGTTGCCGCCTTTGTTCGCGACTGAGGAAATAGCGAACGTGAGAGCCTCCTCGCAGGTTGTTGTCGGAGCCTCGGGGCCGATGACGACGCAAAACCGCTACGTGTATGACTCGAAACAACGCGACCATGTGAGTTTGGATCTTCATCTGTAA 924 0.5206 MDKTSSTTTTSERETHDFMNVDSFSQLPFIRPAPLVREKSGIRLFGIEFAGGNNNSSNNNNNFVVVSAEDSESAEITTAANTNTNINNNKLNSLDLDPSNKEENTPTATSTGTTDTNGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSTMVHGSTFSDAHHVYNLMNYRYGSSIPTPPPPTMPYPTWNNNNNNTRFYGTTTTTSFSHHHQHQQQPINGSPLAFWRIPNGTTINNNNPSFSHERSSTLPPLFATEEIANVRASSQVVVGASGPMTTQNRYVYDSKQRDHVSLDLHL* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0882 307 ProSiteProfiles Zinc finger C2H2 type domain profile. 124 151 IPR013087 -
Gso9g0882 307 MobiDBLite consensus disorder prediction 81 120 - -
Gso9g0882 307 PANTHER ZINC FINGER PROTEIN GIS 1 307 - -
Gso9g0882 307 ProSitePatterns Zinc finger C2H2 type domain signature. 126 146 IPR013087 -
Gso9g0882 307 SUPERFAMILY beta-beta-alpha zinc fingers 121 152 IPR036236 -
Gso9g0882 307 MobiDBLite consensus disorder prediction 81 119 - -
Gso9g0882 307 PANTHER ZINC FINGER PROTEIN GIS 1 307 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0882 Gso-Chr9 19231068 19232695 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0882 9 307 C2H2 Transcription Factor Family AT2G41940 35.390 1.42e-38 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0882 - - gmx:100806594 476.092