Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0873 ATGGCTGTGACACCTTTACTCTCACGCCGCTTCTTCAAAAAACAGTTTCCCCTCTTCTCCTTCTATTCCTCATTCTCCACCACCACCTCATCGCCGCCGCCTCCCATCCGAGTCGCGCTCACCGAGTCCGTGGGCCGCGCGGTCTTCGCCACTCGCCCCATCGCCTCCGGCGACCTCATACACACGGCCACCCCCACTGTCTGCCACCCCTCCTCCTCCTCCGCCCGCGCCGCCTGCTACTCCTGCCTCGCCGCGCTCCCCCACTCCCAATCTCAGGGTATCCCCTTTTGCAGCCAACGCTGCCACCAACGCTCCAAGGGATATTACGATGTTGAGATGAAAGCGAATTGGGTGGCTTTTAATGACTATTGCTGGACCCGTGGTTTGAAATATCCCTTTCTGGTAAAGCGATTGGTTTGCATGGTCATATCAGGAGATGCCAGAAGTGACACTCTTGACATACTTCAGCCTGCCAATTTGACGCCTGAAATGGTTTTAAAGATGGAAGAGGAGTTTCTCTTGCTAAGGAATGCCTTCACAAAGGCACTTATTGCAGATGAACATATTGCCTTTTTAACTAAGCAATGGTACATTAACATTTTGGCACGGATTCGAATTAATGCATTTCGCATTGAGTTGGCTGGAGGACTATATGAAGATCTTCTTGCATCAGCTGTTGCATCTGTGGAAGCTGAAGCTGCTGTTGGAAATGCTGTTTATCTACTTCCATCCTTCTACAATCATGATTGTGACCCTAATGCACACATTATATGGATAGATAATGCAGATGCAAAATTGAAGGCACTCCGTGACATTGTTGAAGGTGAAGAACTTAGAATCTGCTATATTGATGCTAGCCTGGACCGGAATGCTCGGCAAGAGCTACTGTCTCGAGGTTTTGGTTTTCAATGCAATTGTAGTAGGTGCTTGCATGGCGATTAG 942 0.4926 MAVTPLLSRRFFKKQFPLFSFYSSFSTTTSSPPPPIRVALTESVGRAVFATRPIASGDLIHTATPTVCHPSSSSARAACYSCLAALPHSQSQGIPFCSQRCHQRSKGYYDVEMKANWVAFNDYCWTRGLKYPFLVKRLVCMVISGDARSDTLDILQPANLTPEMVLKMEEEFLLLRNAFTKALIADEHIAFLTKQWYINILARIRINAFRIELAGGLYEDLLASAVASVEAEAAVGNAVYLLPSFYNHDCDPNAHIIWIDNADAKLKALRDIVEGEELRICYIDASLDRNARQELLSRGFGFQCNCSRCLHGD* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0873 313 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 42 310 - -
Gso9g0873 313 CDD SET_SMYD 236 309 - -
Gso9g0873 313 Pfam SET domain 45 282 IPR001214 GO:0005515
Gso9g0873 313 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD3 42 310 - -
Gso9g0873 313 Coils Coil 259 279 - -
Gso9g0873 313 Gene3D SET domain 47 309 IPR046341 -
Gso9g0873 313 ProSiteProfiles SET domain profile. 34 283 IPR001214 GO:0005515
Gso9g0873 313 Gene3D - 123 208 - -
Gso9g0873 313 Gene3D - 78 122 - -
Gso9g0873 313 SUPERFAMILY SET domain 32 309 IPR046341 -
Gso9g0873 313 SMART set_7 34 289 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0873 Gso-Chr9 18922724 18939415 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gso9g0873 SET 1.3e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0873 - - gmx:100801270 590.882