Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0861 ATGATGGAGTCAGAAGGAGAAGCTGGGGCAAAGCCAATGAAAACATTGGGTGGCAAAATCTGCCAGATCTGTGGTGATAATATTGGGAACAATGCGAATGGCGATCCTTTCATTGCCTGCGATGTTTGCGCTTTCCCTGTCTGCAGGGCGTGCTATGAATATGAAAGGAAGGATGGAAATCAGTCTTGCCCTCAGTGCAAGACCCGGTACAAGAGGCACAAAGGAAGTCCTGCAATTCTTGGAGACCGAGAAGAGGATGGGGGTGCTGATGATGGTGCCAGTGACTTCAATTACAATTCAGAGAATCAGAATGAAAAGCAGAAGATTGAGCATATGTTGGGCTGGCAAATGGCATATGGGCGTGCAGAGGAGGCCATTGCTCCGAATTATGATAAGGAAGTTTCTCACAATCACATTCCTCTGCTCTCCGGTGGACAAGAGGTTTCTGGAGAATTATCTGCTGCCTCACCTGAGAGGCTGTCAATGGCATCCCCAGGTGGCCGAGGGAAGCGTGCCCATAATCTTCAATATTCGTCTGACCTTAATCATTCACCAAATATCAGGGTTGGGGATCCTGGATTGGGCAATGTGGCATGGAAAGAAAGAGTTGATGGCTGGAAAATGAAGCAAGATAAGAATGTTGCTCCAATGAGCACGGGCCAAGCTACTTCTGAAAGAGGAGCTGGAGATATTGATGCTAGTACTGATGTGCTTGTGGACGATTCCTTGTTGAATGATGAGGCTCGGCAACCCCTCTCTAGGAAGGTTTCTATTCCATCATCTAGGATCAATCCATACCGTATGGTCATTGCTCTGCGGTTGGTTATCCTATGCATTTTTCTGCATTATCGAATAACAAATCCTGTGCCCAATGCATATGCATTGTGGTTGATATCAGTTATATGTGAGATTTGGTTTGCCATATCTTGGATATTGGATCAATTCCCCAAGTGGCTCCCTGTGAACCGTGAAACATATCTTGACAGACTTGCACTAAGATATGATCGGGAAGGGGAACCATCACAGCTAGCAGCTGTTGACATTTTTGTCAGTACTGTTGATCCATTAAAAGAACCCCCGCTTGTGACTGCTAACACTGTCCTATCTATTCTTTCTGTTGACTACCCAGTGGATAAGGTCTCCTGTTATGTCTCTGATGATGGTGCTGCTATGTTGACATTTGAAGCTCTGGCTGAGACATCAGAATTTGCTAGGAAATGGGTTCCTTTCAGCAAGAAATATAATATCGAACCTCGGGCACCTGAGTGGTATTTTGCACAGAAGATTGACTACTTGAAAGATAAGGTTCAACCATCATTTGTCAAAGATCGTAGAGCAATGAAGAGAGAATATGAAGAATTTAAAATTCGCATCAATGGACTTGTTGCAAAGGCACAAAAGATTCCTGAAGAAGGATGGGTGATGCAAGATGGTACGCCATGGCCTGGAAACAACACTAGAGACCATCCAGGAATGATTCAGGTTTTCTTGGGCCAAAGTGGAGGACTTGACACTGAGGGTAATGAACTTCCACGTTTAGTCTATGTTTCTCGTGAAAAGCGTCCAGGGTTCCAACATCACAAGAAGGCTGGTGCCATGAATGCACTTGTTCGAGTGTCAGCAGTCCTTACTAATGGACCTTTCTTATTGAATCTTGATTGTGATCACTACATAAACAACAGTAAAGCCTTGAGGGAAGCTATGTGCTTTATGATGGATCCCAACCTTGGGAAAAATGTTTGCTATGTCCAGTTTCCACAGAGGTTTGATGGTATTGATAGGAATGATCGATATGCCAATCGCAATACTGTTTTCTTTGATATAAACTTGAGAGGTTTGGATGGCATTCAAGGTCCTGTTTATGTGGGTACTGGATGTGTCTTTAATAGAACAGCTTTGTATGGCTACGAACCTCCTATTAAACCCAAGCATAAAAAGCCTGGGTTTCTTTCTTCACTCTGTGGTGGTAACCGAAAGAAGAGATCAAAATCTAGCAAGAAAGGCTCAGACAAGAAAAAATCTAGCAAGAATGTTGACCCAACTGTGCCCATCTTTAGTCTTGAGGATATAGAAGAGGGGGTGGAAGGTGCTGGATTTGATGATGAGAAATCACTACTTATGTCACAAATGAGCCTCGAGAAAAGGTTTGGTCAGTCTGCTGTCTTTGTTGCCTCTACACTCATGGAGAATGGTGGCGTTCCTCAGTCTGCAACTCCAGAAACTCTTCTTAAGGAAGCTATTCATGTTATCAGTTGTGGTTACGAGGATAAATCAGAATGGGGAAGTGAGATAGGATGGATCTATGGTTCTGTCACAGAAGATATTCTTACTGGATTCAAGATGCATGCCCGAGGTTGGAGGTCTATTTACTGCATGCCCAAGCTCCCAGCGTTTAAAGGTTCTGCTCCTATCAATCTTTCAGATCGTCTGAACCAAGTGCTTCGATGGGCTTTAGGTTCGGTGGAAATTCTTTTTAGTCGACATTGTCCCATCTGGTATGGTTATAGTGGAAGGCTAAAGTGGCTCGAGAGGTTCGCATATGTGAACACCACAATCTATCCAGTCACTTCCATTCCCCTTCTCATGTATTGTACCTTACCTGCTGTCTGTCTCCTGACTAACAAGTTCATTATTCCACAGATTAGTAACATTGCAAGTATATGGTTTATCTCTCTCTTTCTTTCCATCTTTGCCACGGGTATCCTTGAGATGAGGTGGAGTGGTGTTGGAATTGATGAGTGGTGGAGAAATGAACAATTTTGGGTTATCGGTGGTGTCTCGGCCCATCTTTTTGCCGTGTTCCAAGGTTTACTCAAAGTGCTTGCTGGAATTGACACTAACTTCACTGTTACCTCAAAAGCATCAGATGAGGATGGAGACTTTGCAGAACTCTACATGTTCAAATGGACAACCCTTCTCATCCCACCCACGACGCTTCTCATCATAAACCTGGTGGGGGTTGTTGCAGGCATCTCCTATGCCATCAACAGTGGCTACCAATCATGGGGTCCCCTCTTTGGTAAGCTTTTCTTTGCATTTTGGGTGATCATCCATCTCTACCCTTTCCTCAAAGGTCTCATGGGTCGCCAGAACAGAACACCAACCATTGTGGTGGTCTGGTCCATTCTTCTTGCATCTATCTTCTCTCTGTTGTGGGTCCGAATTGACCCGTTTACGACAAGAGTCACTGGTCCTGATGTTGAGCAGTGTGGAATCAACTGCTAG 3225 0.4437 MMESEGEAGAKPMKTLGGKICQICGDNIGNNANGDPFIACDVCAFPVCRACYEYERKDGNQSCPQCKTRYKRHKGSPAILGDREEDGGADDGASDFNYNSENQNEKQKIEHMLGWQMAYGRAEEAIAPNYDKEVSHNHIPLLSGGQEVSGELSAASPERLSMASPGGRGKRAHNLQYSSDLNHSPNIRVGDPGLGNVAWKERVDGWKMKQDKNVAPMSTGQATSERGAGDIDASTDVLVDDSLLNDEARQPLSRKVSIPSSRINPYRMVIALRLVILCIFLHYRITNPVPNAYALWLISVICEIWFAISWILDQFPKWLPVNRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILSVDYPVDKVSCYVSDDGAAMLTFEALAETSEFARKWVPFSKKYNIEPRAPEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAKAQKIPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGQSGGLDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKNVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPIKPKHKKPGFLSSLCGGNRKKRSKSSKKGSDKKKSSKNVDPTVPIFSLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATPETLLKEAIHVISCGYEDKSEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKLPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYSGRLKWLERFAYVNTTIYPVTSIPLLMYCTLPAVCLLTNKFIIPQISNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYMFKWTTLLIPPTTLLIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRIDPFTTRVTGPDVEQCGINC* 1075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0861 1074 MobiDBLite consensus disorder prediction 647 680 - -
Gso9g0861 1074 Pfam Zinc-binding RING-finger 11 86 IPR027934 -
Gso9g0861 1074 CDD mRING-HC-C4C4_CesA_plant 19 69 - -
Gso9g0861 1074 SUPERFAMILY Nucleotide-diphospho-sugar transferases 360 887 IPR029044 -
Gso9g0861 1074 Pfam Cellulose synthase 346 1067 IPR005150 GO:0016020|GO:0016760|GO:0030244
Gso9g0861 1074 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 3 96 IPR013083 -
Gso9g0861 1074 ProSiteProfiles Zinc finger RING-type profile. 21 67 IPR001841 -
Gso9g0861 1074 SUPERFAMILY RING/U-box 6 88 - -
Gso9g0861 1074 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 470 637 IPR029044 -
Gso9g0861 1074 PANTHER CELLULOSE SYNTHASE 3 1074 - -
Gso9g0861 1074 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 3 1074 - -
Gso9g0861 1074 MobiDBLite consensus disorder prediction 77 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0861 Gso-Chr9 18491921 18499228 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0861 2 1074 Glycosyltransferase AT5G05170 86.233 0.0 1916
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0861 K10999 - gmx:100814262 2172.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1282 4 34214432 34219125 Gso9g0861 9 18491921 18499228 GST
Gso17g1014 17 9578851 9582436 Gso9g0861 9 18491921 18499228 PCT