Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0837 ATGGAACGGTGTTTATTACTACAAACTTTGGCTTTTGCACTTGTTGCTGTTGTATGCATGTTCAACTTCTTGGTTAATGCCACCACAGATCCTAATGAAGCGAGAGTTTTAAACGCAATCTTTGACAAATGGAGTATAATTGCGAATCATGAACACTGGAACATAAGTGGTGACCTATGCAGTGGAAGGGCCATCGATGACACATCTATCACTGATCAAACTTACAACCCATTCATCAAATGTGATTGTTTCAGGAACAACAACAATACTTGCCACATTACTAAACTGAAGGTTTATGCATTGAGTGTGGTGGGTGAAATTCCAGATGAGCTATGGACTCTAACTTACCTCACAGAATTGGATCTTCGCCAGAATCACTTGACTGGTTCTATATCTTCGGCCATTGGAAATCTAACTCGTATGGAATATTTAACCTTTGGCATCAATGCTTTGTCAGGGGAGCTTCCGAAGGAGTTAGGAAACCTTCTAGAATTGAAATCACTGAGTTTTTCGTCAAACAACTTCTCGGGTTCATTCCCATCTCACCTTGGGAATCTGGTAAACTTAGAACAACTTTATTTGGGTAGTTCGGGAATTAGTGGTTCAATTCCATCCACTTTTTCAAATCTGAAGAATCTGAAGATCGTATACATGAATGATGTGGAACTCAGAGGCAGGATACCAGACTTTATAGGGAATTGGTCTAATCTTAATGTCTTGAGGTTTCAGGGTAATTCTTTTGAAGGCTCAATTCCCTTGTCATTTTCAAATTTGACTTCTTTGATAGAGTTAAGAATAAGTGGTTTGTTTAATGGGAGCTCTTCACTGGCTTTTTTGAGGAATTTGAAGTCTTTGAATATCTTGGAACTGAGGAATAATAATATTTCTGATTCAATTCCATCCTTTATTGGCGATTTCCTTAATTTAACCCAGCTGGATTTAAGCTTCAATAATATCACGGGACAGATTCCAGACTCAATTTTCAATTTGGGTTTACTTTCTTACTTGTTTCTTGGAAATAACAAACTAAGTGGTACCCTCCCTACCCAAAAAAGTGAGTCTCTTCTCTACATAGATTTGTCCTATAATGATCTGTCAGGGACCCTTCCTTCTTGGGTAAACAAACAAAATTTACAGCTCAATTTAGTAGCCAATAACTTGACAATAGAGAGTTCAAATAGCAGGGGTTTGCCTCCGGGGCTAAACTGTTTACAAAAAAATTTTCCTTGCAACCGTGGTGTTGGAAGATATTATGATTTTGCTATGAAGTGTGGTGGTCCTCAAATTACGTCATCAAATGGAGTTGTGTTTGAAATGGACAACCAAACTCTTGGTCCAGCTACCTATTTTGTTACCGATACACATAGATGGGCCGTTAGTAACGTCGGATTATTCACTGGGAGCAACAATCCTCAATATAAAATAACTGTATCTAATCAGTTTACTCAAACCGTGGATCCAGAACTCTTCCAGACAGCTCGACTCTCTGCTTCATCACTGAGATATTATGGCCTGGGATTGGAAAATGGTTTCTACAACATCACCCTCCAATTTGCAGAAACGGTTATTTTGGATAATTCTGAATGGAAAAGTCTTGGGAGAAGAATCTTTGATATTTATATTCAGGGGACTCTTGTTTTAAAGGATTTTAATATAAAAAAGGAGGCTGGGGGCATCTCTTTCAGTGTTGTCCTAAAGAAATTTAGGGTTGAAGTGTTAGAAAATTATCTAGAGATCCATCTCTTTTGGGCTGGAAAAGGGACTTGTTGTATACCAGTTCAAGGTACTTATGGGCCCCTGATTTCAGCCATTAGTGCTATCCCAGATTTTAAACCTACTGTTAGTAACAAACCTCCAAGCAATAAAAGGAACAGAGCTGGTCTAATTGTGGGGATTGTTGTTGGTGTTGGAGCTGTAAGCTTTCTAGTTGTTCTTGCATTCTTCTATGTCATTCGTAAACGAAAGCGTCATGATGATGACGAAGAGCTTTTAGATATTGACACAAAGCCATACACTTTTAGTTATTCCGAATTGAAGAATGCTACAAATGACTTTAATATTGGAAACAAGCTTGGAGAAGGAGGTTTTGGGCCTGTTCATAAGGGAACACTTGATGATGGAAGAGTTATCGCTGTGAAACAACTATCTGTACAATCCAATCAAGGAAAGAATCAGTTCATAGCTGAGATTGCCACTATCTCCGCTGTGCAACATCGTAATCTTGTTAACTTATATGGATGTTGCATTGAAGGAAATAAAAGACTTTTGGTCTATGAGTATCTTGAAAACAAGAGTCTTGATCATGCAATATTTGGAAATTGTTTAAACCTCAGTTGGTCTACACGCTATGTTATATGCTTGGGTATAGCCAGAGGTTTAACTTATTTACATGAAGAGTCGCGAATCCGTATTGTACACCGTGATGTGAAATCTAGTAATATTCTTCTTGATTTGGAGTTTATACCAAAAATATCTGATTTTGGGTTGGCAAAATTATATGATGACAAAAAGACCCATATAAGCACTCGTGTGGCTGGCACAATTGGATATCTTGCACCAGAATATGCCATGCGTGGACATCTTACGGAGAAAGTTGATGTATTTTCCTTTGGTGTTGTGCTTTTGGAGATAGTTAGTGGAAGGCCAAATTCTGATTCAAGTCTGGAAGGAGACAAGATGTATCTTCTAGAATGGGCCTGGCAGCTACATGAAAACAACAATGTAACTGATCTTGTTGATCCTAGATTATTATCTGATTTTAATGACGAGGAAGTAAAACGAATTGTGGGAATATCTCTCTTATGCACTCAAACATCACCAATATTACGACCATCAATGTCCCGTGTGGTAGCAATGCTTTTAGGAGATATTGAAGTGAGCACTGTAACATCAAGGCCTGGATACTTGACTGACTGGAAATTTGATGATGAGATTAGCTTCATGACTGAGGTTGCAACCAAAGGATCAGATACAAGTTTTTACAATTCTTCAGCAAGTTTTAGCATAGTAGGTGGAGCAGATTATTCACCAATTGATGCTTCCAAACCTATCCTTCATGAGACTCTAAGTGAGAGTTCGTAA 3081 0.382 MERCLLLQTLAFALVAVVCMFNFLVNATTDPNEARVLNAIFDKWSIIANHEHWNISGDLCSGRAIDDTSITDQTYNPFIKCDCFRNNNNTCHITKLKVYALSVVGEIPDELWTLTYLTELDLRQNHLTGSISSAIGNLTRMEYLTFGINALSGELPKELGNLLELKSLSFSSNNFSGSFPSHLGNLVNLEQLYLGSSGISGSIPSTFSNLKNLKIVYMNDVELRGRIPDFIGNWSNLNVLRFQGNSFEGSIPLSFSNLTSLIELRISGLFNGSSSLAFLRNLKSLNILELRNNNISDSIPSFIGDFLNLTQLDLSFNNITGQIPDSIFNLGLLSYLFLGNNKLSGTLPTQKSESLLYIDLSYNDLSGTLPSWVNKQNLQLNLVANNLTIESSNSRGLPPGLNCLQKNFPCNRGVGRYYDFAMKCGGPQITSSNGVVFEMDNQTLGPATYFVTDTHRWAVSNVGLFTGSNNPQYKITVSNQFTQTVDPELFQTARLSASSLRYYGLGLENGFYNITLQFAETVILDNSEWKSLGRRIFDIYIQGTLVLKDFNIKKEAGGISFSVVLKKFRVEVLENYLEIHLFWAGKGTCCIPVQGTYGPLISAISAIPDFKPTVSNKPPSNKRNRAGLIVGIVVGVGAVSFLVVLAFFYVIRKRKRHDDDEELLDIDTKPYTFSYSELKNATNDFNIGNKLGEGGFGPVHKGTLDDGRVIAVKQLSVQSNQGKNQFIAEIATISAVQHRNLVNLYGCCIEGNKRLLVYEYLENKSLDHAIFGNCLNLSWSTRYVICLGIARGLTYLHEESRIRIVHRDVKSSNILLDLEFIPKISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKVDVFSFGVVLLEIVSGRPNSDSSLEGDKMYLLEWAWQLHENNNVTDLVDPRLLSDFNDEEVKRIVGISLLCTQTSPILRPSMSRVVAMLLGDIEVSTVTSRPGYLTDWKFDDEISFMTEVATKGSDTSFYNSSASFSIVGGADYSPIDASKPILHETLSESS* 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0837 1026 ProSiteProfiles Protein kinase domain profile. 685 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0837 1026 Pfam Protein tyrosine and serine/threonine kinase 686 953 IPR001245 GO:0004672|GO:0006468
Gso9g0837 1026 ProSiteProfiles Leucine-rich repeat profile. 308 330 IPR001611 GO:0005515
Gso9g0837 1026 Gene3D Transferase(Phosphotransferase) domain 1 761 963 - -
Gso9g0837 1026 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 131 1014 - -
Gso9g0837 1026 CDD STKc_IRAK 691 953 - -
Gso9g0837 1026 Pfam Leucine rich repeat 284 343 IPR001611 GO:0005515
Gso9g0837 1026 Gene3D Ribonuclease Inhibitor 30 271 IPR032675 -
Gso9g0837 1026 Pfam Malectin domain 419 604 IPR021720 -
Gso9g0837 1026 Pfam Leucine Rich repeat 114 131 IPR001611 GO:0005515
Gso9g0837 1026 Gene3D Ribonuclease Inhibitor 272 395 IPR032675 -
Gso9g0837 1026 SMART serkin_6 685 953 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0837 1026 ProSitePatterns Serine/Threonine protein kinases active-site signature. 804 816 IPR008271 GO:0004672|GO:0006468
Gso9g0837 1026 Gene3D Phosphorylase Kinase; domain 1 648 760 - -
Gso9g0837 1026 SUPERFAMILY L domain-like 74 396 - -
Gso9g0837 1026 Gene3D - 418 608 - -
Gso9g0837 1026 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 131 1014 - -
Gso9g0837 1026 SUPERFAMILY Protein kinase-like (PK-like) 668 970 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0837 Gso-Chr9 17360154 17380520 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0837 98 252 Receptor kinase-like Gene Family AT1G56120 28.846 2.24e-09 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso9g0837 PK_Tyr_Ser-Thr 4.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0837 - - gmx:100780567 1990.7