Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0832 ATGGCCATTCCTCTTGTAATCCTACTTATTTGCAAGCTATTATCACTCTTCTCTCAAATCTGCTACGCAACGACGGACACCATCACCAAGGGTCAGCCACTCCCTGATGATGGCAACACCTTGCTTTCCAAGGACGGAACCTTTGAGTTGGGTTTCTTCAACCCCGGGAGTTCAAATAACCGCTATGTCGGAATTTGGTACAAAAACATTGTGGTCAAAACAGTGGTTTGGATCGCCAACCGTGACAACCCAATCAGAAACAACTCAAGCAAGTTGGTCATAAGCCAAGACGGAAACCTCGTTCTTCTTAGCCAGAACGAGTCTCTTATTTGGACAACAAATGCATCATCATCAGAAGTTTCGAGTTCGAGTCCAATTGTGCAGCTCTTGGATACTGGAAACTTGGTAATTAAAGATGGTAATGACAAAGAGAGTGTTTTTCTGTGGCAAAGCTTTGACTATCCTTGTGACACACTATTGCCAGGAATGAAGTTTGGGTGGGACTTGAGAACTGGGCTTAACCGGCGTCTTACTTCTTGGAAAAGCTGGGATGATCCATCTTCAGGGGACTTTACTTGGGGGGTGGAAATAGGAAGCAATCCTGACATTGTGATGTGGAAGGGTAACGTTGAGTACTTTAGGACGGGGCCTTATACTGGGAACATGTTCAGTGGAGTATATGGGCCCAGGAATAACCCACTTTATGATTACAAGTTCGTCAATAACAAAGACGAAGTGTATTACCAATACACCCTCAAGAATAGTTCGGTGATTACTATGATTGTTATGAACCAAACACTTTATCTTCGTCACCGCCTTACATGGATTCCCGAGGCCAAATCTTGGACTGTTTACCAATCATTGCCACGAGATAGTTGCGACGTTTACAACACTTGTGGTCCCAATGGAAATTGCATCATTGCTGGGTCTCCAATTTGCCAGTGCTTAGATGGGTTCGAGCCGAAATCGCCCCAACAATGGAACGTGATGGATTGGAGGCAAGGGTGTGTGCGCAGTGAAGAGTGGAGTTGTGGGGTAAAAAATAAAGATGGTTTTCGGAGATTTGCTAGCATGAAATTGCCAAACACTACGTTTTCTTGGGTTAATGAAAGTATGACACTTGAGGAGTGCAGGGCAAAATGTTTGGAAAATTGTTCGTGCAAGGCCTATTCAAACTTGGACACGAGGGGAGGAGGTAATGGGTGTTCCATTTGGGTTGGTGACCTAGTTGATTTAAGAGTTATAGAAAGTGGGCAAGATTTGTATGTTCGAATGGCCACTTCGGACATGGATGGTAAACACGAGCATCGGAGAAAGGTAGTCTTGGTGGTTTCAACTATAGCATCGTTGGTGCTTGTGATGCTAGTAGCATTCTGCATTTACATGATCAAAAAAATATATAAAGGGAAAACAAAAACAAGAATGTCAAGAGAGGATAAAGACGAAGGCAGACAAGAAGATTTGGAGCTTCCTTTCTTTGATCTTGCTACAATAGTTAATGCCACTAATAATTTTTCAATCGAAAATAAGCTAGGTGAAGGTGGTTTTGGTCCTGTATACAAGGGTACATTAGTAAATGGACAAGAAATTGCAATCAAAAGGCTTTCACGAAGTTCAGGACAAGGATTGAAAGAATTTAGAAATGAAGTTATATTGTGTGCCAAATTACAACACCGAAATCTTGTCAAGGTTTTGGGCTATTGCATTCAAGGAGAGGAGAAAATGTTACTTTATGAATACATGCCCAACAAAAGTCTCGATTTATTTCTTTTTGATTCGGAGCAAAGTAAATTCTTAAATTGGCCAGTGCGCTTTAACATTTTGAATGCGATTGCTCGGGGACTTCTTTATCTCCATCAGGATTCTAGATTAAGGATCATACACAGAGATCTAAAGGCAAGTAATATTTTATTAGACAATAATATGAATCCAAAAATTTCAGATTTTGGCCTTGCAAGAATGTGTGGAAGTGATCAAGTTGAAGGGAGTACAAGCATCATAGTTGGGACACACGGTTACATGGCACCTGAATATGCCATTGATGGATTATTCTCTACAAAATCAGATGTGTTCAGCTTTGGAGTTTTATTGCTAGAAATTATTAGTGGAAAGAAAAACAGAGCATTTACCTACCAAGACAACGATCATAATCTTATTGATCATGCATGGAGACTGTGGAAAGAGGGTACTCCAGAGCGATTGACTGATGCACATTTGGCAAACTCATGTAATATATCTGAAGTCATACGGTGCATTCAAATTAGTCTTCTGTGTCTACAACATCATCCAGATGATAGGCCAAACATGACATCAGTTGTTGTGATGTTGACCAGTGAAAATGCTTTACACGAACCTAAGGAACCTGGTTTTTTAATTAGAAGAGTTTCAAACGAAGGAGAACAATCTTCTAATAGGCAGACATCTTCATTCAATGAAGTATCTATCTCACTTTTAAATGCTAGATAA 2466 0.4055 MAIPLVILLICKLLSLFSQICYATTDTITKGQPLPDDGNTLLSKDGTFELGFFNPGSSNNRYVGIWYKNIVVKTVVWIANRDNPIRNNSSKLVISQDGNLVLLSQNESLIWTTNASSSEVSSSSPIVQLLDTGNLVIKDGNDKESVFLWQSFDYPCDTLLPGMKFGWDLRTGLNRRLTSWKSWDDPSSGDFTWGVEIGSNPDIVMWKGNVEYFRTGPYTGNMFSGVYGPRNNPLYDYKFVNNKDEVYYQYTLKNSSVITMIVMNQTLYLRHRLTWIPEAKSWTVYQSLPRDSCDVYNTCGPNGNCIIAGSPICQCLDGFEPKSPQQWNVMDWRQGCVRSEEWSCGVKNKDGFRRFASMKLPNTTFSWVNESMTLEECRAKCLENCSCKAYSNLDTRGGGNGCSIWVGDLVDLRVIESGQDLYVRMATSDMDGKHEHRRKVVLVVSTIASLVLVMLVAFCIYMIKKIYKGKTKTRMSREDKDEGRQEDLELPFFDLATIVNATNNFSIENKLGEGGFGPVYKGTLVNGQEIAIKRLSRSSGQGLKEFRNEVILCAKLQHRNLVKVLGYCIQGEEKMLLYEYMPNKSLDLFLFDSEQSKFLNWPVRFNILNAIARGLLYLHQDSRLRIIHRDLKASNILLDNNMNPKISDFGLARMCGSDQVEGSTSIIVGTHGYMAPEYAIDGLFSTKSDVFSFGVLLLEIISGKKNRAFTYQDNDHNLIDHAWRLWKEGTPERLTDAHLANSCNISEVIRCIQISLLCLQHHPDDRPNMTSVVVMLTSENALHEPKEPGFLIRRVSNEGEQSSNRQTSSFNEVSISLLNAR* 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0832 821 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Gso9g0832 821 SMART blect_4 32 155 IPR001480 -
Gso9g0832 821 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 186 IPR036426 -
Gso9g0832 821 ProSiteProfiles Protein kinase domain profile. 505 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0832 821 CDD PAN_AP_plant 343 426 - -
Gso9g0832 821 Pfam Domain of unknown function (DUF3403) 778 821 IPR021820 GO:0004674
Gso9g0832 821 Gene3D Phosphorylase Kinase; domain 1 464 580 - -
Gso9g0832 821 ProSiteProfiles Bulb-type lectin domain profile. 25 150 IPR001480 -
Gso9g0832 821 CDD STKc_IRAK 511 777 - -
Gso9g0832 821 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 34 814 - -
Gso9g0832 821 Pfam S-locus glycoprotein domain 213 323 IPR000858 GO:0048544
Gso9g0832 821 Gene3D - 19 152 IPR036426 -
Gso9g0832 821 CDD B_lectin 37 155 IPR001480 -
Gso9g0832 821 SMART ntp_6 347 425 IPR003609 -
Gso9g0832 821 Pfam Protein tyrosine and serine/threonine kinase 506 775 IPR001245 GO:0004672|GO:0006468
Gso9g0832 821 SMART serkin_6 505 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0832 821 ProSiteProfiles EGF-like domain profile. 289 325 IPR000742 -
Gso9g0832 821 SUPERFAMILY Protein kinase-like (PK-like) 488 799 IPR011009 -
Gso9g0832 821 Gene3D Hepatocyte Growth Factor 343 427 - -
Gso9g0832 821 Pfam D-mannose binding lectin 74 181 IPR001480 -
Gso9g0832 821 PIRSF SRK 1 821 IPR024171 GO:0004674
Gso9g0832 821 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 34 814 - -
Gso9g0832 821 Gene3D Transferase(Phosphotransferase) domain 1 581 788 - -
Gso9g0832 821 Pfam PAN-like domain 344 412 IPR003609 -
Gso9g0832 821 ProSiteProfiles PAN/Apple domain profile. 344 426 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0832 Gso-Chr9 17142021 17146606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0832 441 793 Receptor kinase-like Gene Family AT4G23230 55.367 3.85e-127 393
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso9g0832 PK_Tyr_Ser-Thr 6.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0832 - - gmx:100776310 1669.83