Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0818 ATGATGGGAGAGAAAAGCAACAGCAACAGCGGCGACGCGATTAACTCGACGCTGCTCCACGGGAAGTACGAGCTGGGGCGGCTGTTAGGCCACGGAAGCTTCGCGAAGGTATACCACGCGCGCCACCTAAACACCGGAAAGAGCGTGGCGATGAAGGTGGTGGGAAAAGAGAAGGTGGTGAAGGTAGGCATGATGGAACAAATCAAGAGAGAGATCTCAGCCATGAACATGGTGAAGCACCCGAACATCGTTCAACTTCACGAGGTCATGGCGAGCAAGTCCAAGATCTACATCGCCATGGAGCTCGTGCGCGGCGGCGAGCTCTTCAACAAGATCGCCAGAGGCCGGCTCCGGGAGGAAACCGCCAGACTTTACTTCCAACAACTCATCTCCGCGGTGGACTTCTGCCACAGCCGCGGCGTCTTCCACCGCGACCTCAAGCCGGAGAACCTCCTCCTCGACGACGATGGCAACCTCAAGGTCACTGACTTCGGCCTCAGCACTTTCTCCGAGCATCTCAGGCACGACGGCCTGCTGCACACTACGTGTGGCACGCCGGCCTACGTTGCGCCTGAGGTCATCGGAAAAAGAGGTTACGACGGCGCCAAGGCTGATATTTGGTCTTGTGGCGTAATCCTCTACGTACTTCTTGCTGGTTTTTTACCTTTCCAGGATGAAAACTTGGTGGCTTTGTACAAGAAAATTTACCGCGGTGACTTCAAGTGTCCACCGTGGTTTTCCTCCGAGGCACGGAGGCTCATCACCAAGCTCCTCGACCCGAACCCGAACACGCGAATCACGATTTCGAAAATCATGGACTCGTCGTGGTTCAAGAAACCCGTGCCAAAGAACTTGGTGGGAAAGAAAAGAGAGGAATTGAACTTGGAGGAAAAGATTAAACATCAGGAGCAAGAAGTTTCCACTACGATGAATGCATTTCACATCATTTCCCTTTCGGAAGGGTTCGATTTGTCGCCGTTGTTCGAGGAGAAGAAGAGGGAGGAGAAAGAGTTACGTTTCGCCACCACGCGCCCCGCGAGTAGCGTGATTTCGAGATTGGAAGATTTAGCGAAGGCGGTGAAGTTCGACGTGAAAAAGAGCGAGACTAAGGTGAGGTTGCAGGGTCAAGAAAATGGGCGAAAAGGTAAACTCGCTATTGCTGCGGATTTGTACGCCGTGACGCCGTCGTTTTTGGTCGTGGAGGTTAAGAAAGACAACGGTGACACCTTGGAGTATAACCAGTTCTGCAGCAAGGAGCTTCGGCCAGCGCTCAAGGACATCGTGTGGAGGACTTCTCCTGCAGAGAATCCTACACTCGCTTGA 1323 0.5344 MMGEKSNSNSGDAINSTLLHGKYELGRLLGHGSFAKVYHARHLNTGKSVAMKVVGKEKVVKVGMMEQIKREISAMNMVKHPNIVQLHEVMASKSKIYIAMELVRGGELFNKIARGRLREETARLYFQQLISAVDFCHSRGVFHRDLKPENLLLDDDGNLKVTDFGLSTFSEHLRHDGLLHTTCGTPAYVAPEVIGKRGYDGAKADIWSCGVILYVLLAGFLPFQDENLVALYKKIYRGDFKCPPWFSSEARRLITKLLDPNPNTRITISKIMDSSWFKKPVPKNLVGKKREELNLEEKIKHQEQEVSTTMNAFHIISLSEGFDLSPLFEEKKREEKELRFATTRPASSVISRLEDLAKAVKFDVKKSETKVRLQGQENGRKGKLAIAADLYAVTPSFLVVEVKKDNGDTLEYNQFCSKELRPALKDIVWRTSPAENPTLA* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0818 440 Gene3D Transferase(Phosphotransferase) domain 1 105 281 - -
Gso9g0818 440 SMART serkin_6 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0818 440 Gene3D Phosphorylase Kinase; domain 1 20 104 - -
Gso9g0818 440 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Gso9g0818 440 ProSiteProfiles Protein kinase domain profile. 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0818 440 PANTHER - 15 435 - -
Gso9g0818 440 Pfam NAF domain 308 366 IPR004041 GO:0007165
Gso9g0818 440 Coils Coil 285 305 - -
Gso9g0818 440 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165
Gso9g0818 440 CDD CIPK_C 311 425 - -
Gso9g0818 440 SUPERFAMILY Protein kinase-like (PK-like) 20 286 IPR011009 -
Gso9g0818 440 ProSitePatterns Protein kinases ATP-binding region signature. 29 56 IPR017441 GO:0005524
Gso9g0818 440 Gene3D Kinase associated domain 1, KA1 304 430 - -
Gso9g0818 440 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 15 435 - -
Gso9g0818 440 Pfam Protein kinase domain 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0818 Gso-Chr9 15861913 15864062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0818 1 434 CBL-interacting serine-threonine protein kinases AT4G30960 72.523 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gso9g0818 Pkinase 3e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0818 - K07198 gmx:100806762 862.448