Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0813 ATGACATGGCCTATTCGAATGCAAATTGCCATAGAGACAACTATTGCATTGGCCTATCTCCATACTTCTAACATCATCCACCGTGATGTCAAAACCAACAACATTGTACTTGACATTAATGTTTCGGTTAAGGTAGCAGATTTTGGGCTTTCAAGATTGCTCCCCAATGATGTAAGCCATGTCTCCATAGCTCCACAAGGGTTTCTGGGGTATCTTGACCCTCAATATTTCCAATTCTACAGGCTCACGGACAAGAGTGATGTGTATAGCTTTGGGGTTGTACTTATTAAGCTGATATCATCCATGCCGGCAGTTGATGCAGCCAGGGAAAGAGATGAAGTTAACTTGGCAAATCTTTCCATGAAAAAGATTCAAAAAGGAAAGCTTAGTGAGCTTGTAGACCCATCCTTTGGGTTTGAGTCAAACCAATTCTGGAAGCTCTCAATAAATTATGAGTCTGAGAATCTAGAGAAAGAAGATGATGATGGTGTTATCTCTTCCACTTCATCCAGCGAAGTACATCCACCCCAACCAGCTTCACAGGACTCGGGTCAAGTTGGAATTTTAATGAATAATAAGCTACCAACTTCACCGAATTCCTTGACTGAGAAACTGGAAAGTCCTGGTGCAGTCACTTCATTTGGTTACCGTACGGATCGTAATGGTCAATGGCTGAAGAAAGATGCACTTCCTCCACAAGATGAGCACACTCATTCTCCTCCTCCTCAGCGAGATGATTCAGCCCTTATGACTGAAGTTCTTTCAGAGTTACAGGGTCTTCGCACTTATGTTGGTGAACGTTTTGATTCTTTGGATAATCGCTTTGCAGGAATGGATATCCATCTCACACAGCTTGAAGAAGATGTGGGATATATTCGTCACAGCTTCGATCTTCCACCACCACCACCACCTTCTTAG 918 0.4281 MTWPIRMQIAIETTIALAYLHTSNIIHRDVKTNNIVLDINVSVKVADFGLSRLLPNDVSHVSIAPQGFLGYLDPQYFQFYRLTDKSDVYSFGVVLIKLISSMPAVDAARERDEVNLANLSMKKIQKGKLSELVDPSFGFESNQFWKLSINYESENLEKEDDDGVISSTSSSEVHPPQPASQDSGQVGILMNNKLPTSPNSLTEKLESPGAVTSFGYRTDRNGQWLKKDALPPQDEHTHSPPPQRDDSALMTEVLSELQGLRTYVGERFDSLDNRFAGMDIHLTQLEEDVGYIRHSFDLPPPPPPS* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0813 305 ProSitePatterns Serine/Threonine protein kinases active-site signature. 25 37 IPR008271 GO:0004672|GO:0006468
Gso9g0813 305 SUPERFAMILY Protein kinase-like (PK-like) 1 112 IPR011009 -
Gso9g0813 305 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 1 143 IPR044652 -
Gso9g0813 305 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 1 143 - -
Gso9g0813 305 Gene3D Transferase(Phosphotransferase) domain 1 1 159 - -
Gso9g0813 305 MobiDBLite consensus disorder prediction 166 207 - -
Gso9g0813 305 ProSiteProfiles Protein kinase domain profile. 1 156 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0813 305 MobiDBLite consensus disorder prediction 221 242 - -
Gso9g0813 305 Pfam Protein kinase domain 8 124 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0813 305 MobiDBLite consensus disorder prediction 157 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0813 Gso-Chr9 15293178 15314102 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0813 1 207 Receptor kinase-like Gene Family AT1G25390 47.391 5.46e-61 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Gso9g0813 Pkinase 2.2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0813 - - gmx:100805366 597.045