Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0794 ATGAAGGAAGCCTCTAGAAATAATCTTCACTTAGGATCTACAGCAACCATTGTTTTGGTAGCAGATAATAACATTTTGGTTGCCAATATTGGAGACTTTAAGGCCATCTTGTGCTCTAAAAATTTTTAGTCTCCCAAAGAGGCTAACGGTGGTGGTCAAGTTCAAAATTGGGGTGGTGTGCCTCGCATAAATGGTCAGCTGGCTATTACACGGGCTATTGGTGATATACTCTTTAAAAGTTATGGTGTTATATATGCACCAGAAGTGATTGATTGGCAGCCTCTGACTGCTAATGATGGATATTTGGTGGTAGCATCAGATGGTGTATTTGAGAAGATGAATGTGCAGGATGTTTGTGATTTGTTGTGGGAAGTAACATGA 381 0.399 MKEASRNNLHLGSTATIVLVADNNILVANIGDFKAILCSKNF*SPKEANGGGQVQNWGGVPRINGQLAITRAIGDILFKSYGVIYAPEVIDWQPLTANDGYLVVASDGVFEKMNVQDVCDLLWEVT* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0794 125 PANTHER PROTEIN PHOSPHATASE 2C 50-RELATED 5 43 - -
Gso9g0794 125 Gene3D - 1 124 IPR036457 -
Gso9g0794 125 SUPERFAMILY PP2C-like 7 123 IPR036457 -
Gso9g0794 125 PANTHER ALPHABET, ISOFORM E-RELATED 49 124 - -
Gso9g0794 125 PANTHER ALPHABET, ISOFORM E-RELATED 5 43 - -
Gso9g0794 125 Pfam Protein phosphatase 2C 7 120 IPR001932 -
Gso9g0794 125 CDD PP2Cc 12 123 IPR001932 -
Gso9g0794 125 ProSiteProfiles PPM-type phosphatase domain profile. 1 125 IPR001932 -
Gso9g0794 125 PANTHER PROTEIN PHOSPHATASE 2C 50-RELATED 49 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0794 Gso-Chr9 13922433 13923434 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0794 2 124 PP2C-type Phosphatase Gene Family AT3G63320 42.541 7.43e-42 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0794 - - gmx:102668765 244.202