Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0793 ATGAATAGTATTTGCTTTCATGGTCCACACAGACACAGCACTACGTTTAGCATAGATCATTTTTGTATATGGCCTGTTGGTGACTTGGGTCTGTCCAAAGTGAAGTGCCAGACTTTAATATCTGGTGGTGTTAGAGGAACTCTACCTTGGATGGCCCCAGAACTGCTAAACGGGAGCAGTAGCCTTGTTTCAGAGAAGGTTGACGTGCTTTCATTTGGTATTGTCATGTGGGAACTCCTCACGGGAGAAGAGCCATATGCTGATTTGCACTATGGGGCCATCATAGGTGGTATTGTAAACAACACATTACGACCTCCAGTTCCAGAATCTTGTGATCCAGAATGGAGATTGCTGATGGAGAGGTGCTGGTCATCAGAACCATCAGAAAGACCTTCCTTCTCTGAGATTGCTAATGGATTACGTTCCATGGCAACCAAGATCTCTCCCAAAGGACAAAATCAACAGCAGCAACCTGCTGCACTGCAAAGTCAAGTTCAGAAATGA 504 0.4504 MNSICFHGPHRHSTTFSIDHFCIWPVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVLSFGIVMWELLTGEEPYADLHYGAIIGGIVNNTLRPPVPESCDPEWRLLMERCWSSEPSERPSFSEIANGLRSMATKISPKGQNQQQQPAALQSQVQK* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0793 167 Gene3D Transferase(Phosphotransferase) domain 1 14 167 - -
Gso9g0793 167 PANTHER SERINE-THREONINE PROTEIN KINASE 26 149 - -
Gso9g0793 167 Pfam Protein tyrosine and serine/threonine kinase 26 138 IPR001245 GO:0004672|GO:0006468
Gso9g0793 167 ProSiteProfiles Protein kinase domain profile. 1 144 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0793 167 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 26 149 - -
Gso9g0793 167 MobiDBLite consensus disorder prediction 144 167 - -
Gso9g0793 167 SUPERFAMILY Protein kinase-like (PK-like) 20 138 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0793 Gso-Chr9 13808940 13810128 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0793 20 160 MAP Kinase Kinase Kinase AT3G46920 78.014 8.53e-73 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Gso9g0793 PK_Tyr_Ser-Thr 4.6e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0793 - - gmx:112997651 317.39