Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0787 ATGGATAACCAAAATGCCATCGAGTTCTTTGAAGGCCAAAACCTTTTGTACATGCAGATATTTGGTAACCTAAGACCTGTGTGTCTTATGTGGGCTTGCGAACTAGGTATTCCAGACATAATATCCAACCATGGGAAACCCATTACTCTTCTTGAGTTGGTCTCAGCCCTGCAAATTCCACCATCTAAGGTGGGTTTTGTGAAGCGATTCATGCGCTTTTTGGCACACAATAGAATCTTTGATATCCATGAGAGCCAGGAAGATCATCATGAATTAGCGTATGCTCTAACTCCTGCATCAAAGCTTCTAGTCAATGACAGTATCCATTGTTTATCTCCAATGCTTCAGTTCATGACTGATCCTTGCAATTTTTTTTTGGTTATGGCAAGTGATTCCCGAATGGTAGACTTGGTACTAAAAAATTGCACTTCAATTTTTGAGGAGCTAGATTCCATCGTGGATGTAGGTGGTGGAACTGGAACCACAGCCAGAATTATTTGTGAGACATTTCCTAAGTTGAAATGTGTTGTGCTTGACCTTCCTCATGTTGTAGCAAACTTGACGGGAAGCAATCGTTTAAGTTTTGTCGGCAGCGATATGTTCAAATCCATCCCTCAAGCCGATGCAGTCCTACTAAAGTGGGTTTTACATGATTGGAATGAAGAAAATTGCATAAAGATCCTCAAAAGGTGTAAAGATTCTATTTCAAGCAAAGGCAACAGAGGGAAAATAATAATCATAGATGCAGTAATAAATGAAAAGCTAGATGACCAGGATAAGACTCAAACTAAGCTCTGTATGGATATAGCTATGATGATCGCTTTTAATGGAAACGAGCGAACTGAAGAAGAATGGAAACAACTCTTCATTGGAGCAGGATTCCAACACTACAAAATATATCATACTTTTGGTTTTAGATCTCTTATTGAGGTCTATCCTTAA 942 0.3907 MDNQNAIEFFEGQNLLYMQIFGNLRPVCLMWACELGIPDIISNHGKPITLLELVSALQIPPSKVGFVKRFMRFLAHNRIFDIHESQEDHHELAYALTPASKLLVNDSIHCLSPMLQFMTDPCNFFLVMASDSRMVDLVLKNCTSIFEELDSIVDVGGGTGTTARIICETFPKLKCVVLDLPHVVANLTGSNRLSFVGSDMFKSIPQADAVLLKWVLHDWNEENCIKILKRCKDSISSKGNRGKIIIIDAVINEKLDDQDKTQTKLCMDIAMMIAFNGNERTEEEWKQLFIGAGFQHYKIYHTFGFRSLIEVYP* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0787 313 PANTHER O-METHYLTRANSFERASE 2 121 IPR016461 GO:0008168
Gso9g0787 313 PANTHER O-METHYLTRANSFERASE 127 312 IPR016461 GO:0008168
Gso9g0787 313 Gene3D Vaccinia Virus protein VP39 112 313 IPR029063 -
Gso9g0787 313 PIRSF O-mtase 1 127 IPR016461 GO:0008168
Gso9g0787 313 PIRSF O-mtase 123 313 IPR016461 GO:0008168
Gso9g0787 313 Gene3D - 1 103 IPR036388 -
Gso9g0787 313 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 2 121 - -
Gso9g0787 313 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 127 312 - -
Gso9g0787 313 Pfam O-methyltransferase domain 128 295 IPR001077 GO:0008171
Gso9g0787 313 Pfam Dimerisation domain 28 75 IPR012967 GO:0046983
Gso9g0787 313 SUPERFAMILY "Winged helix" DNA-binding domain 9 106 IPR036390 -
Gso9g0787 313 CDD AdoMet_MTases 152 239 - -
Gso9g0787 313 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 124 313 IPR016461 GO:0008168
Gso9g0787 313 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 128 312 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0787 Gso-Chr9 13175300 13177377 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0787 15 311 Monolignol Biosynthesis Gene Families AT5G54160 30.523 3.14e-36 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0787 K22588 K13262 gmx:100800912 640.573