Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0773 ATGGAAGTAACGAACAAAAGCTCTTCCTTCACTTTCTCTTCCTTTGATTGCTGCTCTTCCGAGTCCAACCCCAACAAGCCCAGCAGAATCAAAGGCCCATGGAGCACCGAAGAGGTTCAAATCCTAATCAGACTCGTCGAACGATACGACCCACAAAATTGGTCCCTCATCAGTCGCTACATTAAGGGTAGGTCCAACAAGTTGTGCCTGCTCCGATGGTGCAATCAGCTTAGCCCCCCCATGGAGCATCGCCCCTTCTCGGCCCAAGAAAACGACACCATCATCGTAGCCTATGCCAAGTACGATAACAGGTGGGCCACTATAGCCCGATTGCTACCGGGCCGAACCAATAATGCCATTAAGAACCACTGGAACTCCATTCTCAAGCGTAGAGCCAAAGGTATTCAAAGAACCGATAAGTGGCCATGA 429 0.5012 MEVTNKSSSFTFSSFDCCSSESNPNKPSRIKGPWSTEEVQILIRLVERYDPQNWSLISRYIKGRSNKLCLLRWCNQLSPPMEHRPFSAQENDTIIVAYAKYDNRWATIARLLPGRTNNAIKNHWNSILKRRAKGIQRTDKWP* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0773 142 CDD SANT 85 128 IPR001005 -
Gso9g0773 142 PANTHER MYB PROTEIN-RELATED 1 137 - -
Gso9g0773 142 PANTHER TRANSCRIPTION FACTOR MYB44-LIKE 1 137 - -
Gso9g0773 142 ProSiteProfiles Myb-like domain profile. 26 77 IPR001005 -
Gso9g0773 142 ProSiteProfiles Myb-like domain profile. 78 128 IPR001005 -
Gso9g0773 142 Gene3D - 30 82 - -
Gso9g0773 142 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 83 132 IPR017930 -
Gso9g0773 142 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 26 81 IPR017930 -
Gso9g0773 142 CDD SANT 33 75 IPR001005 -
Gso9g0773 142 Gene3D - 84 141 - -
Gso9g0773 142 Pfam Myb-like DNA-binding domain 34 91 - -
Gso9g0773 142 SUPERFAMILY Homeodomain-like 28 124 IPR009057 -
Gso9g0773 142 SMART sant 82 130 IPR001005 -
Gso9g0773 142 SMART sant 30 79 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0773 Gso-Chr9 12485008 12485436 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0773 29 134 MYB Transcription Factor Family AT3G50060 65.094 1.71e-48 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gso9g0773 Myb_DNA-bind_6 1.1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0773 - - gmx:121172832 288.115