Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0764 ATGGGGAAGAAAAAGAAGCAGGTAGGAGAAACAAGTGAAGATAGAGGAAATCATAAGAAAGTTGAAGATAAAAGCCCCAACTCATATGACAATGATACCTTGGCGTTTATATCAATGGCTCAAGAGTTGAAGGATGAAGGGAACAAGTTTTTCCAGAAGCGGGATGCTGAAGGAGCTTTGGTAAAATATGAGAAGGCACTCAAATTGCTTCCAAGGAATCATGTAGATGTTTCGTATCTGCGGAGTAACATGGCTGCGTGCTACATGCAGATGGGACTCGGTGAGTATCCTAGAGCAATCCGTGAATGCAATTTGGCTCTTGAAGTATCGCCAAAATATAGTAAAGCTCTGATGAAGAGGGCCAGGTGCCATGAGGCTTTAAATAGGCTGGATTTGGCGCTAAAAGATCTTAGTGCTGTTTTAAAGATAGAGCCAAATAATATCATGGCATTGGAGGTCTTGGGTAAGGTGAAGCATGCCCTTGAAGATAGGGGATTAATAGTAAATGATACAGAAATTGAGTTGCCTCCAGATTATGTTGAACCTCCTGCTTTGCCTCTGGAAAAAGTAGTGAAACAAAAGACACACAAGAAGAAGAGAAACAAAGAGAAGGTGAAGGCTTCTGATAAAATTGAAGAAAAGCAAGGTGAGGAGAAATTGGAAGAGAAGAAATCTGAGGACAGCATTGTAATAAAGAAGGCCGGGGGCAGTCTGAAAGAGAAGAAGGCTAACAAATCTAAAAAGAAGGCCAAGGAAAGAATTGATGAGAAGAAGGATGATGTTAAGGAGGTTATTGAGGAAAAAAGTAATGGTAGAAGTGAAGATATACCTAAGAAAACAGCAAAACTTATTTTTGGTGAGGATATAAGATGGGCTGAATTGCCACTTAATTGCAGCCTCCTTCAGCTGAGAGAAGTTATTTGTGACCGGTTCCCTAGACTAGGAGCAGTTCTTGTCAAATATAGGGACCAAGAGGGTGATCTGGTTACTATCACTTCTGATGAAGAATTAAGGTGGGCTGAAACTGGATCACAGGGTTCTATCCGGCTGTACATAGTGGAAGCTAATCCTGATCACGATCCATTATTTGAGAAATTTAATGTGAAGAATGGAGAAAAGGTTAACACTTATAGTTCTCCTGTGAATGGTTCTGTGGTGAAAGCGAAGGACATTATTAGCTCATCATGCATTGAGGACTGGATAATTCTGTTTGCACAACTGTTCAAGAACAATGTTGGATTTGAATCTGACAGATATTTAGATTTTCATGAATTTGGGATGAAGCTCTATTCAGAGGCTGTTGAGGAGACAATTACAAGTGACGAAGCACAAGGCATATTTGACATTGCTGGTGGTAAGTTCCAAGAGATGGCAGCTCTAGCATTGTTCAACTGGGGAAATGTGCATATGTCCAGGGCAAGGAAGAAAGTGTATTTTACTGAAGATTCTTCAAAAGAGCATATGCATGAACAAATCAAAAGTTCGTATGAATGGGCGCAGAAAGAATATGCAAAAGCTGGGGAAAAATATGAAACAGCCATTGATATTAAGCCAAATTTTTATGAAGGCTTCCTGGCTCTGGGACAGCAGCAGTTTGAGCAAGCAAAACTTTCTTGGGATTATGCACTCTGTAGTAATGTAGATTTAGCAACATGGCCCTCCACTGAGGTTCTTCAGCTTTACAACAGTGCCGAGGAAAATATGGAGAAAGGAATGCTGATATGGGAAGAATCAGGAGGGCAACAATTGAGTGAAATCTTTGATCCCAAGGATATTGGATTACATCTGCAGAACATGGGATTGGATGGGCTATTCAAAAATATGTCATCAGATGAAATTGCTGCACAGGTGGAAAATATGAAGTCTCAAATAAATCTTCTGTGGGGTACCATGCTATATGAACTCTCGATAGTGGAGTTCAAATTAGGGCTACCGGTATGGCATGAAAGTTTGGAAGATGCAGCTGAGAAGTTTGAACTTGCTGGAGCTTCTGCAACAGATATAGCTGTAATGTTGAAGAACCACTGTTCTAATAACACTGATGGTCTTGGATTCAAAATTGATGAAATAGTACAAGCATGGAATGAGATGTATGAAGCTAAAAAGTGGCAGAAAGGTGTTTCATCATTTCGTTTGGAGCCCTTGTTTAGAAGAAGAATATCTAAAGTTTACCATGCCTTTGAGCTAGTATGA 2193 0.4008 MGKKKKQVGETSEDRGNHKKVEDKSPNSYDNDTLAFISMAQELKDEGNKFFQKRDAEGALVKYEKALKLLPRNHVDVSYLRSNMAACYMQMGLGEYPRAIRECNLALEVSPKYSKALMKRARCHEALNRLDLALKDLSAVLKIEPNNIMALEVLGKVKHALEDRGLIVNDTEIELPPDYVEPPALPLEKVVKQKTHKKKRNKEKVKASDKIEEKQGEEKLEEKKSEDSIVIKKAGGSLKEKKANKSKKKAKERIDEKKDDVKEVIEEKSNGRSEDIPKKTAKLIFGEDIRWAELPLNCSLLQLREVICDRFPRLGAVLVKYRDQEGDLVTITSDEELRWAETGSQGSIRLYIVEANPDHDPLFEKFNVKNGEKVNTYSSPVNGSVVKAKDIISSSCIEDWIILFAQLFKNNVGFESDRYLDFHEFGMKLYSEAVEETITSDEAQGIFDIAGGKFQEMAALALFNWGNVHMSRARKKVYFTEDSSKEHMHEQIKSSYEWAQKEYAKAGEKYETAIDIKPNFYEGFLALGQQQFEQAKLSWDYALCSNVDLATWPSTEVLQLYNSAEENMEKGMLIWEESGGQQLSEIFDPKDIGLHLQNMGLDGLFKNMSSDEIAAQVENMKSQINLLWGTMLYELSIVEFKLGLPVWHESLEDAAEKFELAGASATDIAVMLKNHCSNNTDGLGFKIDEIVQAWNEMYEAKKWQKGVSSFRLEPLFRRRISKVYHAFELV* 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0764 730 ProSiteProfiles TPR repeat profile. 114 147 IPR019734 GO:0005515
Gso9g0764 730 MobiDBLite consensus disorder prediction 1 30 - -
Gso9g0764 730 ProSiteProfiles TPR repeat profile. 40 73 IPR019734 GO:0005515
Gso9g0764 730 SMART tpr_5 114 147 IPR019734 GO:0005515
Gso9g0764 730 SMART tpr_5 40 73 IPR019734 GO:0005515
Gso9g0764 730 SMART tpr_5 78 113 IPR019734 GO:0005515
Gso9g0764 730 Pfam PB1 domain 280 353 IPR000270 GO:0005515
Gso9g0764 730 PANTHER PROTEIN PHOX3 2 729 - -
Gso9g0764 730 SMART PB1_new 278 355 IPR000270 GO:0005515
Gso9g0764 730 Gene3D - 277 355 - -
Gso9g0764 730 PANTHER PROTEIN CLMP1 2 729 IPR044517 -
Gso9g0764 730 CDD PB1 282 352 - -
Gso9g0764 730 SUPERFAMILY TPR-like 39 163 IPR011990 GO:0005515
Gso9g0764 730 MobiDBLite consensus disorder prediction 191 219 - -
Gso9g0764 730 Gene3D Tetratricopeptide repeat domain 36 166 IPR011990 GO:0005515
Gso9g0764 730 MobiDBLite consensus disorder prediction 1 27 - -
Gso9g0764 730 SUPERFAMILY CAD & PB1 domains 279 365 - -
Gso9g0764 730 MobiDBLite consensus disorder prediction 205 219 - -
Gso9g0764 730 ProSiteProfiles PB1 domain profile. 278 355 IPR000270 GO:0005515
Gso9g0764 730 Coils Coil 240 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0764 Gso-Chr9 12185320 12190790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0764 23 147 Calmodulin-binding Proteins AT3G25230 33.094 5.12e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0764 - - gmx:100820306 1380.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0906 17 8441392 8446247 Gso9g0764 9 12185320 12190790 PCT
Gso9g0764 9 12185320 12190790 Gso17g0906 17 8441392 8446247 PCT