Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0753 ATGACGTCACGATCGGGGCAGGGGAGCAGCGGCGGAGGGAGCAGCAGGACCCGTGTGGGGAAGTACGAGCTGGGTCGGACGCTGGGCGAGGGCAATTTCGCCAAGGTGAAATTCGCGAGGCACGTGGAAACTAGAGAGAACGTCGCCATCAAGATTCTCGACAAGGAGAAACTACTCAAACACAAAATGATTGCGCAGATAAAACGAGAAATATCAACAATGAAACTGATTAGACACCCAAATGTCATACGCATGTATGAGGTAATGGCTAGCAAAACAAAGATATACATTGTATTGGAATTTGTGACTGGTGGGGAGCTGTTTGATAAAATTGCACGCAGTGGGAGGTTGAAAGAAGATGAAGCAAGAAAATACTTTCAACAGCTTATATGTGCTGTGGATTACTGTCATAGTAGAGGTGTTTTCCATAGAGACTTAAAGCCTGAGAATTTATTGCTGGATGCTAATGGAGTGCTTAAAGTATCAGATTTTGGATTGAGTGCATTGCCTCAACAAGTTCGGGAAGATGGACTACTTCACACAACATGCGGTACGCCGAATTATGTTGCTCCAGAGGTGATTAACAACAAAGGTTATGACGGTGCAAAGGCAGATTTATGGTCATGTGGTGTTATTCTCTTTGTTTTAATGGCTGGCTATTTGCCCTTTGAAGAAACCAATCTATCAGCTTTATATAAAAAGATTTTCAAGGCCGAGTTCACATGTCCTCCGTGGTTCTCTTCAAGTGCAAAGAAGCTAATCAACAAAATCCTTGATCCCAATCCTGCCACTCGGATTACATTTGCTGAGGTCATTGAGAATGACTGGTTCAAGAAGGGATATAAGCCTCCCGTATTTGAACAGGCTAATGTTAGTCTTGATGATTTAGATTCTATTTTCAGTGATTCTACGGATTCACAAAATCTTGTTGTAGAGAGGCGTGAAGAGGGACCTATGGCACCTGTGGCACCTGTGACTATGAATGCCTTTGAGCTTATCTCTAAATCTCAGGGCCTCAATCTTAGTAGTCTTTTTGAGAAGCAAATGGGACTAGTTAAAAGGGAAACACGATTTACATCCAAATGTTCAGCAGATGAAATAATTTCAAAAATAGAGAAAGCTGCAGGACCCCTGGGTTTTGATGTTAAGAAGAACAACTGTAAGTTAAAGATTCAAGGTGAAAAGACAGGACGGAAAGGTCATCTATCTGTAGCCACTGAGATCTTAGAGGTGGCCCCTTCACTATACATGGTTGAGCTGCGAAAGTCTGAAGGAGATACTCTCGAATTTCACAAGTTCTACAAAAATCTTGCTACTGGGCTGAAGGATATTGTTTGGAAAGCCGAGCCTATCGATGAAGAAAAAGATGGTGCCAATCCATCGAAATAA 1389 0.4248 MTSRSGQGSSGGGSSRTRVGKYELGRTLGEGNFAKVKFARHVETRENVAIKILDKEKLLKHKMIAQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLEFVTGGELFDKIARSGRLKEDEARKYFQQLICAVDYCHSRGVFHRDLKPENLLLDANGVLKVSDFGLSALPQQVREDGLLHTTCGTPNYVAPEVINNKGYDGAKADLWSCGVILFVLMAGYLPFEETNLSALYKKIFKAEFTCPPWFSSSAKKLINKILDPNPATRITFAEVIENDWFKKGYKPPVFEQANVSLDDLDSIFSDSTDSQNLVVERREEGPMAPVAPVTMNAFELISKSQGLNLSSLFEKQMGLVKRETRFTSKCSADEIISKIEKAAGPLGFDVKKNNCKLKIQGEKTGRKGHLSVATEILEVAPSLYMVELRKSEGDTLEFHKFYKNLATGLKDIVWKAEPIDEEKDGANPSK* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0753 462 PANTHER SERINE/THREONINE KINASE 16 452 - -
Gso9g0753 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Gso9g0753 462 Pfam NAF domain 324 384 IPR004041 GO:0007165
Gso9g0753 462 ProSiteProfiles Protein kinase domain profile. 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0753 462 CDD CIPK_C 328 443 - -
Gso9g0753 462 MobiDBLite consensus disorder prediction 1 20 - -
Gso9g0753 462 SMART serkin_6 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0753 462 CDD STKc_SnRK3 21 276 - -
Gso9g0753 462 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Gso9g0753 462 SUPERFAMILY Protein kinase-like (PK-like) 19 307 IPR011009 -
Gso9g0753 462 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 16 452 - -
Gso9g0753 462 Gene3D Kinase associated domain 1, KA1 327 447 - -
Gso9g0753 462 ProSiteProfiles NAF domain profile. 322 346 IPR018451 GO:0007165
Gso9g0753 462 MobiDBLite consensus disorder prediction 1 16 - -
Gso9g0753 462 Gene3D Transferase(Phosphotransferase) domain 1 15 326 - -
Gso9g0753 462 Pfam Protein kinase domain 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0753 Gso-Chr9 11883663 11892554 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0753 5 455 CBL-interacting serine-threonine protein kinases AT1G01140 67.396 0.0 648
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gso9g0753 Pkinase 3.2e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0753 - - gmx:100788746 900.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0951 17 8926060 8929799 Gso9g0753 9 11883663 11892554 PCT