Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0696 ATGAGGAGCCAACTTGTGTGTAATGGGTGTAGGAGCATCTTGGTTTACCCTAGAGGAGCAACCAATGTTTGCTGTGCGTTGTGCAACACCATTACCTCTGTTCCTCCTCCTGGAATGGACATGTCACAACTCTATTGTGGAGGCTGTACGACATTGCTAATGTACACACGTGGTGCTACAAGTGTGAGATGTTCCTGCTGTCACACTATTAACCTTGTACCAGAATCTAATCAAGTCATTCATTGTGCGAACTGCCGGACAACACTCATGTATCCTTATGGAGCTTCCTCAGTCAAATGTGCAATTTGTTGCTATATTACTAATATCAGTATGACCAATGGAAGGCTTTCAATTCCTGTACAGAGACCAAATGGAACAGCCAACTCTGGAACAGTATCTTCAACTTCATCGTCAATGCCTTATTCTCAGAGCCAAACTGTCGTAGTAGAAAATCCTATGTCTGTTGATTCGAGTGGGAAATTGGTGAGGAATGTCGTTGTGGGCGTTACAACAGATAAGAAATGA 525 0.4324 MRSQLVCNGCRSILVYPRGATNVCCALCNTITSVPPPGMDMSQLYCGGCTTLLMYTRGATSVRCSCCHTINLVPESNQVIHCANCRTTLMYPYGASSVKCAICCYITNISMTNGRLSIPVQRPNGTANSGTVSSTSSSMPYSQSQTVVVENPMSVDSSGKLVRNVVVGVTTDKK* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0696 174 MobiDBLite consensus disorder prediction 120 139 - -
Gso9g0696 174 PANTHER PROTEIN LSD1 1 174 IPR040319 -
Gso9g0696 174 TIGRFAM LSD1: zinc finger domain, LSD1 subclass 43 73 IPR005735 -
Gso9g0696 174 TIGRFAM LSD1: zinc finger domain, LSD1 subclass 80 107 IPR005735 -
Gso9g0696 174 TIGRFAM LSD1: zinc finger domain, LSD1 subclass 4 34 IPR005735 -
Gso9g0696 174 Pfam LSD1 zinc finger 46 70 IPR005735 -
Gso9g0696 174 Pfam LSD1 zinc finger 7 31 IPR005735 -
Gso9g0696 174 Pfam LSD1 zinc finger 82 106 IPR005735 -
Gso9g0696 174 PANTHER PROTEIN LSD1 1 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0696 Gso-Chr9 9865230 9871041 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-LSD Gso9g0696 zf-LSD1 2.2e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0696 - - gmx:100776644 337.035