Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0694 ATGGAGCAGTTGAAATTGGCTGCAGATTCTGAAGCCAAAGAGGATAAGTCTTTGGGGCACAAGCCAAAAAATAACAATGCGCTTGAGTCTTCTGACAGTCTGAGAAATAAAAAGATATCAGCTCGATGGGATCCGGTTGAAGCAAGTCGGCCTATAATTGAAGAAGCACCTGTTTTTTATCCGACTATTGAAGAATTTGATGACACACTCAGTTACATAGCAAAGATACGACCCCTAGCTGAACCCCATGGCATCTGTAGGATTGTTCCCCCTGCTTGCTGGGCTCCACCCTGTCCTCTTAAGGAGAAAGATCTATGGGAAAATACTGAGTTTCCCACCCGTATTCAACAAATTGATTTGCTTCAAAATAGGGAACCTATGAGGAAAAAAAGTAGTGGAAGGAAGCGAAAACGTAGAAAGCACTCCAAAACAGGCACATGTAGGAGGAAGCCTGCCAATGCAGCTTCTGAAGCTAAGAATGCTTCTGAGTCTGAAGAGAAATTTGGATTCCAATCAGGGTCAGACTTCACACTTAAAGACTTTCAGCTATATGCTGATTTTTTTAAGGAATGCTACTTTGGGTTGAGAGATACTAATGGAGACAGAATAGTGAGTGACAATAACCATCAAAAGATATGGGAGCCCTCTGAGGAGGAAATTGAAGGTGAATACTGGCGAATAATTGAGCAACCAACTGATGAGGTGTATTATGGAGCTGACTTGGAAACTGGAGCACTTGGAAGTGGTTTTCCTAAGGCTTCATCCTTAACTAAGAGTGAATCAGATCAATATGCCCAGTCTGGCTGGAATCTGAACAATTTTGCCCGACTGCCAGGTTCTGTACTAAGTTATGAAGGAAGTGACATATCAGGAGTTCTAGTGCCATGGCTGTATGTTGGCATGTGTTTTTCATCATTTTGCTGGCATGTTGAGGACCATCACCTCTATTCACTAAACTATTTGCACTGGGGGGACCCAAAAGTATGGTATGGAGTACCTGGAAGCCATGCTGCAGCCTTGGAAAAAGTAATGAGGAAGCACTTGCCTGACTTATTTGAGGAACAACCAAATCTACTCAATGATCTGGTTACCCAGTTTTCTCCTTCAATTCTTAAATCTGAGGGAGTGCCTGTGTATCGCACAGTTCAGCATTCTGGGGAATTCGTTATTACCTTTCCAAGGGCATATCATGCTGGCTTCAATTGTGGCTTCAACTGTGCAGAGGCAGTGAATGTGGCTCCTATTGATTGGTTAATGCATGGACAAAGTGCTGTCGAGCTTTACAGGTTACAATGCCGCAAGACATCCCTGTCACATGACAAGCTGTTGTTTGGGTCAGCACTGGAATCTGTACGAGCCCTTGCAGAGCTAGCTCTTGGAAAGGAAACTCCAAAAAATTTGAAATGGGGAAGTGTCTGTGGGAAAGATGGAGATCTTACCAAGGCAGTTAGGGCAAGGATAAAGATGGAAGAAGAAAGGCTGGACTGTCTTCCAACTCATCTTAAGTTGCTGAAGATGAACAGTAACTTTGATTTGTACAAGGAAAGAGAATGCTTCTCTTGCTTCTATGACTTGCACCTATCTGCTGTGGGTTGTGAGTGCTCCCCTGACAGATATTCATGTCTTAAGCATGCTAATTTGTTCTGCTCGTGCGAAATGGAGAAAAGATTTGTTCTGCTTCGATATACTATAAGTGAACTGAATAAATTGCTAGAAGCATTAGAAGGAGATTCACATGCTATTGAGGTGTGGGCAAATAAAAACTTCGGAATGGTTTCTGCCAATGCCAATGAGGTTTGCATAGATAAACCAGATCTTGAGAAAGACATGTACAGAACCAAGAATTGTGAAGAAATGGAAAGCTCAACTGGCTGTGTCAGAACCAAGGATAGGTCAAATTTAAACGCACCTAGCAGTCCTAATAGTCATATTACTACAGAGATAGTGCAGTTTGAGTCTCACCCTGTAACATGTGCAGCATATGACAGTATAGATAGTCGGCATGACAATAATAATGATAAAAATTTGATCACAGACAGCAAAGATAAAGTGGATCAGGCTGGTTCTCTGGATTTGAATCTAGATGTTATCTCTGGTGAAAATGAAAATCATTTGCTGCATATTGCTGATAACCATCATAATAAAGGTGTTTCAGTAGAGGAAAAAGTATGCTGTTCAGAAGCCAAAAAGGAAGAAGACATCATGGAACTTTGTGGTGAGGGTAACTTATCAAACTTGTTTTCTGTTCTAAAGACAGATTTTTCATCTTGTTCAAGGGGTGTTCGCAATTATTGTACATTTGATGGTGGAAAAATTGAGAAGGATCTGCAAGTGGATTCAGATTCAGGAAAGCAGCACAGCAATCTATTTGAAAGGGAAGTCATAGTCACCACACATACTAGTACATCTTTGATGGACGAAAGCTGCTTAGTGCAAATGTTTGGTACTTCTGTCAAGCTTGTAAGTTTGGGATCTGTTGTTTATGGAAAGCTCTGGTGTAGTAAGCACACACTATATCCAAAAGGATTCAAGACTCAAGTTAATTTCTTTAGCATTGTTGATCCAAAAAGAATCTGTAGCTATATCTCTGAAGTCATTGATGCTGGATTTCTTGGACCTCTTTTCAAGGTTACCATGGAAGAATGTCCAAGTGAGGCTTTCACAGATACCTCAGCAGATAATTGCTGGGAATCAGTTCTGAAGAGATTACATCATGAAATCATGAGGCAAAAGAGTCTAGGTGAACTAGAACTTCCTCCGTTTGAGCTCCTGAAAAGCATTAACGGTCATAGAATGTTTGGCTTCAAATTGCCATCTATTATTCAGGCCATTGAAGCTCAAGATCCTAGTCATCTGTGTGTAGAGTACTGGAATCACAAAGTTGCCCCTTCCGGCAGTGTTGTTGATAACTTCCCATTTGGTTCCAGTAGCTCTTTAGGTAATATCAATACCAAAATTTTTGGTATCGATTTGATTAAGCAGGAAAAGGATAACATCCTTGAAGAGATGAAATCAATACTGCAAGGGGCAAGTCCCGATGAGTTAAGGACAATGCATAAGTTAATAATCTCTGATGCACAGTGCTGTGAGTGGAGAGTGGCATTGATAGCACTGATGGATGGGATCCGAAATGCTTGTCAATAA 3144 0.4113 MEQLKLAADSEAKEDKSLGHKPKNNNALESSDSLRNKKISARWDPVEASRPIIEEAPVFYPTIEEFDDTLSYIAKIRPLAEPHGICRIVPPACWAPPCPLKEKDLWENTEFPTRIQQIDLLQNREPMRKKSSGRKRKRRKHSKTGTCRRKPANAASEAKNASESEEKFGFQSGSDFTLKDFQLYADFFKECYFGLRDTNGDRIVSDNNHQKIWEPSEEEIEGEYWRIIEQPTDEVYYGADLETGALGSGFPKASSLTKSESDQYAQSGWNLNNFARLPGSVLSYEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKVWYGVPGSHAAALEKVMRKHLPDLFEEQPNLLNDLVTQFSPSILKSEGVPVYRTVQHSGEFVITFPRAYHAGFNCGFNCAEAVNVAPIDWLMHGQSAVELYRLQCRKTSLSHDKLLFGSALESVRALAELALGKETPKNLKWGSVCGKDGDLTKAVRARIKMEEERLDCLPTHLKLLKMNSNFDLYKERECFSCFYDLHLSAVGCECSPDRYSCLKHANLFCSCEMEKRFVLLRYTISELNKLLEALEGDSHAIEVWANKNFGMVSANANEVCIDKPDLEKDMYRTKNCEEMESSTGCVRTKDRSNLNAPSSPNSHITTEIVQFESHPVTCAAYDSIDSRHDNNNDKNLITDSKDKVDQAGSLDLNLDVISGENENHLLHIADNHHNKGVSVEEKVCCSEAKKEEDIMELCGEGNLSNLFSVLKTDFSSCSRGVRNYCTFDGGKIEKDLQVDSDSGKQHSNLFEREVIVTTHTSTSLMDESCLVQMFGTSVKLVSLGSVVYGKLWCSKHTLYPKGFKTQVNFFSIVDPKRICSYISEVIDAGFLGPLFKVTMEECPSEAFTDTSADNCWESVLKRLHHEIMRQKSLGELELPPFELLKSINGHRMFGFKLPSIIQAIEAQDPSHLCVEYWNHKVAPSGSVVDNFPFGSSSSLGNINTKIFGIDLIKQEKDNILEEMKSILQGASPDELRTMHKLIISDAQCCEWRVALIALMDGIRNACQ* 1048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0694 1047 PANTHER DEMETHYLASE JMJ14-LIKE PROTEIN, PUTATIVE-RELATED 10 1045 - -
Gso9g0694 1047 Pfam F/Y rich C-terminus 872 960 IPR003889 GO:0005634
Gso9g0694 1047 Pfam F/Y-rich N-terminus 817 865 IPR003888 GO:0005634
Gso9g0694 1047 SMART JmjN_1 55 96 IPR003349 -
Gso9g0694 1047 SUPERFAMILY Clavaminate synthase-like 197 448 - -
Gso9g0694 1047 Pfam jmjN domain 57 90 IPR003349 -
Gso9g0694 1047 ProSiteProfiles FYR domain FYRC motif profile. 870 960 IPR003889 GO:0005634
Gso9g0694 1047 Gene3D - 813 954 - -
Gso9g0694 1047 ProSiteProfiles JmjN domain profile. 56 97 IPR003349 -
Gso9g0694 1047 Pfam JmjC domain, hydroxylase 296 412 IPR003347 -
Gso9g0694 1047 Gene3D Cupin 41 413 - -
Gso9g0694 1047 ProSiteProfiles FYR domain FYRN motif profile. 810 868 IPR003888 GO:0005634
Gso9g0694 1047 PANTHER LYSINE-SPECIFIC DEMETHYLASE 10 1045 - -
Gso9g0694 1047 MobiDBLite consensus disorder prediction 129 147 - -
Gso9g0694 1047 SMART fyrc_3 874 966 IPR003889 GO:0005634
Gso9g0694 1047 ProSiteProfiles JmjC domain profile. 266 429 IPR003347 -
Gso9g0694 1047 MobiDBLite consensus disorder prediction 121 166 - -
Gso9g0694 1047 Pfam C5HC2 zinc finger 518 570 IPR004198 -
Gso9g0694 1047 SMART cupin_9 263 429 IPR003347 -
Gso9g0694 1047 MobiDBLite consensus disorder prediction 1 22 - -
Gso9g0694 1047 MobiDBLite consensus disorder prediction 1 34 - -
Gso9g0694 1047 SMART fyrn_3 824 868 IPR003888 GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0694 Gso-Chr9 9826032 9835876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0694 64 1042 JUMONJI Transcription Factor Family AT4G20400 45.763 0.0 812
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Gso9g0694 JmjC 2.4e-47 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0694 - - gmx:100781830 2101.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1564 15 21507036 21515662 Gso9g0694 9 9826032 9835876 GST