Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0683 ATGCAGTGCTTATTTCTCCAAACTTTTTTCCCCCTATTTTTCTTCTGGGAAATCAGCAAAATGGCATCTGATCTGAATTCGGGGTTGTCCAAGAAAACATTTGTTTTTGGATTGAAAGTGTGGGTACTAATGGGAATAATAGTTGGATTATTCATCATAATCATTCTCGTGGTGCTATCAATATGTCTCACTTTACGAAAGAAGTTCAGAAGAGTCAATGGCAAGCTTCCACTTAGCCATGTGATATCTGTTTCAGACGAGATCAAAGAAATCAAAGTTGATCAAGTTTCAGCAAATAATCATCCTCAAAATGGTGTTTTTAAGAGTCTGAATGACAAATTTGGTGACAGGGAGTCTGAAAAGGTTTTGAACCAAACAATGAATGGGGATAATAGTAGTCAATCAGGTTCATTTAATCATTTAGAGAAAGATGCTAATGGCTCTCAATCAGGTGAAGACTGCTGTGTTAAGAGCATTTCTGCTTACAGATCTTCTTCACATCCTATAACCGCACCATCCCCTTTGTCTGGTCTGCCTGAATTCTCTCACCTTGGTTGGGGCCACTGGTTTACATTGAGGGACCTGGAACTTGCAACAAACAGGTTTGCAAAAGATAATGTTATTGGTGAAGGTGGGTATGGAATTGTTTATCGTGGTCAATTAATCAATGGGAATCCTGTGGCCATTAAGAAGCTCCTCAATAATTTAGGACAAGCTGAAAAAGAATTCAGGGTGGAAGTTGAGGCTATTGGTCATGTGCGGCATAAGAACTTGGTTCGACTTTTGGGCTATTGCATTGAAGGCACTCACAGGTTGTTGATTTATGAGTATGTTAATAATGGAAATTTAGAGCAGTGGCTTCATGGAGCCATGCGACAACATGGCTTTCTTACTTGGGATGCTCGGATAAAAATTCTCCTTGGAACAGCTAAAGCGCTGGCCTACTTGCATGAGGCAATTGAGCCAAAAGTTGTGCATCGAGATATTAAGTCGAGCAATATTCTAATTGATGAGGACTTTAATGCCAAAATATCGGACTTTGGGTTGGCTAAGTTACTTGGAGCTGGAAAAAGTCATATTACAACCAGAGTTATGGGTACTTTTGGATATGTAGCTCCAGAATATGCCAATTCTGGCTTGCTAAATGAGAAGAGTGATGTTTATAGCTTTGGGGTATTGCTCCTTGAAGCAATTACAGGAAGAGACCCTGTGGATTATAGCCGACCAGCAGCTGAGGTAAATTTGGTTGACTGGCTCAAGATGATGGTGGGGTGTCGATGCTCAGAAGAGGTGTTGGATCCTAACATTGAAACTAGGCCATCGACAAGTACCCTTAAGCGTGCCCTCTTGACTGCTTTGAGGTGCGTTGATCCAGATGCTGAAAAAAGACCAAGGATGAGCCAAGTTGTTCGCATGCTTGAATCAGAGGAATATCCTATACCGCGAGAGGATCGAAGACGCCGAAGGAGTCAGGCAGGAAACATGGAGGTAGAGACTCATAGGGAGAACTCTGATACTGATAAGAGCGACAATCCAGATTATAAGCCCAGTGGCTTAAGGAACCAACGCGTGTAG 1575 0.4184 MQCLFLQTFFPLFFFWEISKMASDLNSGLSKKTFVFGLKVWVLMGIIVGLFIIIILVVLSICLTLRKKFRRVNGKLPLSHVISVSDEIKEIKVDQVSANNHPQNGVFKSLNDKFGDRESEKVLNQTMNGDNSSQSGSFNHLEKDANGSQSGEDCCVKSISAYRSSSHPITAPSPLSGLPEFSHLGWGHWFTLRDLELATNRFAKDNVIGEGGYGIVYRGQLINGNPVAIKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRLLIYEYVNNGNLEQWLHGAMRQHGFLTWDARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDEDFNAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVLLLEAITGRDPVDYSRPAAEVNLVDWLKMMVGCRCSEEVLDPNIETRPSTSTLKRALLTALRCVDPDAEKRPRMSQVVRMLESEEYPIPREDRRRRRSQAGNMEVETHRENSDTDKSDNPDYKPSGLRNQRV* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0683 524 CDD STKc_IRAK 208 474 - -
Gso9g0683 524 MobiDBLite consensus disorder prediction 126 149 - -
Gso9g0683 524 Gene3D Phosphorylase Kinase; domain 1 183 277 - -
Gso9g0683 524 ProSiteProfiles Protein kinase domain profile. 202 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0683 524 ProSitePatterns Protein kinases ATP-binding region signature. 208 231 IPR017441 GO:0005524
Gso9g0683 524 MobiDBLite consensus disorder prediction 477 524 - -
Gso9g0683 524 MobiDBLite consensus disorder prediction 477 514 - -
Gso9g0683 524 ProSitePatterns Serine/Threonine protein kinases active-site signature. 324 336 IPR008271 GO:0004672|GO:0006468
Gso9g0683 524 Gene3D Transferase(Phosphotransferase) domain 1 278 489 - -
Gso9g0683 524 SUPERFAMILY Protein kinase-like (PK-like) 186 482 IPR011009 -
Gso9g0683 524 SMART serkin_6 202 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0683 524 Pfam Protein kinase domain 203 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0683 524 PANTHER RECEPTOR-LIKE KINASE PLANT 22 524 - -
Gso9g0683 524 PANTHER OS01G0323000 PROTEIN 22 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0683 Gso-Chr9 9470838 9476212 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0683 37 476 Trihelix Transcription Factor Family AT1G70460 40.355 8.10e-93 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Gso9g0683 Pkinase 1.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0683 - - gmx:100818864 969.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1552 15 20734896 20740277 Gso9g0683 9 9470838 9476212 GST
Gso7g1976 7 43728506 43733432 Gso9g0683 9 9470838 9476212 PCT
Gso17g0329 17 2969418 2974370 Gso9g0683 9 9470838 9476212 PCT
Gso9g0683 9 9470838 9476212 Gso7g1976 7 43728506 43733432 PCT
Gso9g0683 9 9470838 9476212 Gso17g0329 17 2969418 2974370 PCT