Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0673 ATGGAAGATAAAATTGTGATAAATGAATTGCTGCAAGATGAGGAAAAGCCATCATCTGATAATACTATGGGATCTACTCTCCTCAGCTTGAGCCTGAATAACTCAGGACAATCCCTTAACCAAATGGGGATGCTGCGAATCAAGCTTGAGGAAGCAAAGAAAGAGAATGAAATCTTAAAGGCTATGCTGAATCAGGTTAATGAACACTGCACTACTCTTCAGAATCGCATACTTTTTGAGATGCAGCAGCATCAACTATCAGCTTCATCATCATCACCTCGCAATAATAATAATCATCATGACTCGCAGGGAAATAAACAAGATGCCGAGAAACCAATGCTACACACTCGGCAGTTTTTGAATATTGGCGAGTCTTCAATTTTAGACGGCAACACAAAAGCATGTGCAATAGCAGAAAACGTTGAAAAGAAGATATTAGGCAAAAACCTTGCAAGTGATATTAATAAGTACAATGTTAAAGGTGAAATCAACAGTCAAATAACATTGAATGAAGTAAAAAGCACAGAAGATCAAGCATCTGAGGTTACTTGCAGGAGAGCTAGAGTGTCCATAAGAGCACGATCAGATTTTTCTTTGATGGGCGATGGGTGTCAATGGAGAAAGTACGGACAAAAGACAGCGAAAGGCAACCCTTGTCCTCGAGCCTACTACCGTTGCAGCATGGGAACTGCATGCCCAGTTCGTAAGCATGTGCAAAGGTGTTTTAAGGATGAGACTATTCTCATCACAACCTATGAAGGGAACCACAACCATCCACTCCCACCAGCAGCAAGACCCTTGGCAAGCTCAACATCAGCTGCACTGAACATGTTCCTTTCTGGCTCAATCACAAGCTCACATTGCACCACTACTCTCTCAAACTCACCCCTCTTCTCTTCATCACCATCCACTATTTCCCCAAGTACTGCTGTGGCCACTTTCTCCCACAATGCAACATGCCCCACAGTAACACTGGACCTAACCCAGCCCAACAACTATCTCCAATTCCAAAGAGCCACCACTTCTTCACAAGACCGCCATACACCATCATTTTTCCCTCTTCCATTGCATGGAAACCCTCAAAATTATTCTGAGGATTTGATGCACTTGTGGTATAGGGTTCCACTTCCAACCATGTTAGCCCCAGAGAATAAAAACCTTGCCCTAGTGGATGTTGTCAGTGAGGCTATAACCAAAGATCCTTCTCTCAAAGCAGCATTGTTTTCAGCCATTTCCTCACTCACTGAAGATCCTGATCAGAAGAACAACATCAATAACCAAAGCCAACTTAGTAAGAGTAGTGGTGGTTATGACCCTTGTTCTAAGGTGCCTGCAATAATACCACCTCATCAGCCTTGCACTACTCAGTTGATTTAG 1377 0.4292 MEDKIVINELLQDEEKPSSDNTMGSTLLSLSLNNSGQSLNQMGMLRIKLEEAKKENEILKAMLNQVNEHCTTLQNRILFEMQQHQLSASSSSPRNNNNHHDSQGNKQDAEKPMLHTRQFLNIGESSILDGNTKACAIAENVEKKILGKNLASDINKYNVKGEINSQITLNEVKSTEDQASEVTCRRARVSIRARSDFSLMGDGCQWRKYGQKTAKGNPCPRAYYRCSMGTACPVRKHVQRCFKDETILITTYEGNHNHPLPPAARPLASSTSAALNMFLSGSITSSHCTTTLSNSPLFSSSPSTISPSTAVATFSHNATCPTVTLDLTQPNNYLQFQRATTSSQDRHTPSFFPLPLHGNPQNYSEDLMHLWYRVPLPTMLAPENKNLALVDVVSEAITKDPSLKAALFSAISSLTEDPDQKNNINNQSQLSKSSGGYDPCSKVPAIIPPHQPCTTQLI* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0673 458 MobiDBLite consensus disorder prediction 416 437 - -
Gso9g0673 458 Gene3D WRKY domain 185 262 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso9g0673 458 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 11 430 IPR044810 GO:0003700
Gso9g0673 458 MobiDBLite consensus disorder prediction 85 110 - -
Gso9g0673 458 Coils Coil 42 69 - -
Gso9g0673 458 ProSiteProfiles WRKY domain profile. 195 261 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso9g0673 458 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 11 430 - -
Gso9g0673 458 SUPERFAMILY WRKY DNA-binding domain 193 261 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso9g0673 458 SMART WRKY_cls 200 260 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso9g0673 458 MobiDBLite consensus disorder prediction 85 100 - -
Gso9g0673 458 MobiDBLite consensus disorder prediction 416 436 - -
Gso9g0673 458 Pfam WRKY DNA -binding domain 202 259 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0673 Gso-Chr9 9042454 9049238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0673 45 329 WRKY Transcription Factor Family AT4G04450 40.705 1.76e-62 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso9g0673 WRKY 1.5e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0673 - - gmx:100816719 847.04